Merge pull request #114 from dbmi-bgm/dmichaels-update-utils-for-vuln… #757
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| # foursight-cgap GA Workflow | |
| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| build: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-22.04 | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.11' | |
| - name: Install Deps | |
| run: pip install poetry | |
| - name: Configure AWS Credentials | |
| uses: aws-actions/configure-aws-credentials@v1 | |
| with: | |
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| aws-region: us-east-1 | |
| - name: QA | |
| env: | |
| S3_ENCRYPT_KEY: ${{ secrets.S3_ENCRYPT_KEY }} | |
| DEV_SECRET: ${{ secrets.DEV_SECRET }} | |
| # GLOBAL_ENV_BUCKET required set by tibanna but not used for anything | |
| GLOBAL_ENV_BUCKET: some-bucket | |
| run: | | |
| make build | |
| make test | |
| - name: Create the gitinfo file | |
| run: | | |
| echo "{\"repo\": \"https://github.com/${{ github.repository }}\", \"ref\": \"${GITHUB_REF}\", \"branch\": \"${GITHUB_REF##*/}\", \"commit\": \"${GITHUB_SHA}\"}" > chalicelib_cgap/gitinfo.json | |
| - name: Upload the gitinfo.json file as an artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: gitinfo | |
| path: chalicelib_cgap/gitinfo.json |