feat: support for different MetadataStores in VectorStore #144

konrad-czarnota-ds · 2024-10-24T08:14:39Z

No description provided.

packages/ragbits-core/src/ragbits/core/vector_store/chromadb_store.py

…ectorstore

github-actions · 2024-10-24T08:52:22Z

Code Coverage Summary

Filename                                                                                                     Stmts    Miss  Cover    Missing
---------------------------------------------------------------------------------------------------------  -------  ------  -------  ------------------------------------------
packages/ragbits-core/src/ragbits/core/__init__.py                                                               0       0  100.00%
packages/ragbits-core/src/ragbits/core/config.py                                                                 7       0  100.00%
packages/ragbits-core/src/ragbits/core/embeddings/__init__.py                                                   11       0  100.00%
packages/ragbits-core/src/ragbits/core/embeddings/base.py                                                        4       0  100.00%
packages/ragbits-core/src/ragbits/core/embeddings/noop.py                                                        4       0  100.00%
packages/ragbits-core/src/ragbits/core/llms/__init__.py                                                         14       8  42.86%   27-39
packages/ragbits-core/src/ragbits/core/llms/base.py                                                             41       5  87.80%   45, 64, 134-136
packages/ragbits-core/src/ragbits/core/llms/factory.py                                                          23       4  82.61%   50, 53, 66, 77
packages/ragbits-core/src/ragbits/core/llms/litellm.py                                                          40      13  67.50%   9-10, 55, 86, 92-109
packages/ragbits-core/src/ragbits/core/llms/types.py                                                             9       2  77.78%   25, 29
packages/ragbits-core/src/ragbits/core/llms/clients/__init__.py                                                  4       0  100.00%
packages/ragbits-core/src/ragbits/core/llms/clients/base.py                                                     23       0  100.00%
packages/ragbits-core/src/ragbits/core/llms/clients/exceptions.py                                               14       6  57.14%   7-8, 17, 26-27, 36
packages/ragbits-core/src/ragbits/core/llms/clients/litellm.py                                                  49      10  79.59%   9-10, 69, 107, 121-126
packages/ragbits-core/src/ragbits/core/llms/clients/local.py                                                    36      12  66.67%   10-11, 61-69, 90-101
packages/ragbits-core/src/ragbits/core/metadata_stores/__init__.py                                              12       3  75.00%   27-30
packages/ragbits-core/src/ragbits/core/metadata_stores/base.py                                                   6       0  100.00%
packages/ragbits-core/src/ragbits/core/metadata_stores/exceptions.py                                             4       0  100.00%
packages/ragbits-core/src/ragbits/core/metadata_stores/in_memory.py                                             13       0  100.00%
packages/ragbits-core/src/ragbits/core/prompt/__init__.py                                                        2       0  100.00%
packages/ragbits-core/src/ragbits/core/prompt/base.py                                                           20       0  100.00%
packages/ragbits-core/src/ragbits/core/prompt/parsers.py                                                        35       0  100.00%
packages/ragbits-core/src/ragbits/core/prompt/prompt.py                                                        124       0  100.00%
packages/ragbits-core/src/ragbits/core/prompt/discovery/__init__.py                                              2       0  100.00%
packages/ragbits-core/src/ragbits/core/prompt/discovery/prompt_discovery.py                                     33       2  93.94%   54-55
packages/ragbits-core/src/ragbits/core/utils/_pyproject.py                                                      37       0  100.00%
packages/ragbits-core/src/ragbits/core/utils/config_handling.py                                                 16       4  75.00%   32-33, 37-38
packages/ragbits-core/src/ragbits/core/utils/decorators.py                                                      29       0  100.00%
packages/ragbits-core/src/ragbits/core/vector_stores/__init__.py                                                14       1  92.86%   28
packages/ragbits-core/src/ragbits/core/vector_stores/base.py                                                    22       0  100.00%
packages/ragbits-core/src/ragbits/core/vector_stores/chroma.py                                                  50       2  96.00%   69-70
packages/ragbits-core/src/ragbits/core/vector_stores/in_memory.py                                               24       0  100.00%
packages/ragbits-core/tests/unit/__init__.py                                                                     0       0  100.00%
packages/ragbits-core/tests/unit/llms/__init__.py                                                                0       0  100.00%
packages/ragbits-core/tests/unit/llms/test_litellm.py                                                           64       0  100.00%
packages/ragbits-core/tests/unit/llms/factory/__init__.py                                                        3       0  100.00%
packages/ragbits-core/tests/unit/llms/factory/test_get_default_llm.py                                           10       0  100.00%
packages/ragbits-core/tests/unit/llms/factory/test_get_llm_from_factory.py                                       8       0  100.00%
packages/ragbits-core/tests/unit/llms/factory/test_has_default_llm.py                                           10       0  100.00%
packages/ragbits-core/tests/unit/metadata_stores/__init__.py                                                     0       0  100.00%
packages/ragbits-core/tests/unit/metadata_stores/test_in_memory.py                                              22       0  100.00%
packages/ragbits-core/tests/unit/prompts/__init__.py                                                             0       0  100.00%
packages/ragbits-core/tests/unit/prompts/test_parsers.py                                                        65       0  100.00%
packages/ragbits-core/tests/unit/prompts/test_prompt.py                                                        155       0  100.00%
packages/ragbits-core/tests/unit/prompts/discovery/__init__.py                                                   0       0  100.00%
packages/ragbits-core/tests/unit/prompts/discovery/prompt_classes_for_tests.py                                  30       0  100.00%
packages/ragbits-core/tests/unit/prompts/discovery/test_prompt_discovery.py                                     18       0  100.00%
packages/ragbits-core/tests/unit/prompts/discovery/ragbits_tests_pkg_with_prompts/__init__.py                    2       1  50.00%   3
packages/ragbits-core/tests/unit/prompts/discovery/ragbits_tests_pkg_with_prompts/prompts/__init__.py            3       2  33.33%   2-4
packages/ragbits-core/tests/unit/prompts/discovery/ragbits_tests_pkg_with_prompts/prompts/temp_prompt1.py       14       0  100.00%
packages/ragbits-core/tests/unit/prompts/discovery/ragbits_tests_pkg_with_prompts/prompts/temp_prompt2.py       14       0  100.00%
packages/ragbits-core/tests/unit/utils/test_decorators.py                                                       26       2  92.31%   17, 39
packages/ragbits-core/tests/unit/utils/pyproject/test_find.py                                                   13       0  100.00%
packages/ragbits-core/tests/unit/utils/pyproject/test_get_config.py                                              9       0  100.00%
packages/ragbits-core/tests/unit/utils/pyproject/test_get_instace.py                                            37       0  100.00%
packages/ragbits-core/tests/unit/vector_stores/__init__.py                                                       0       0  100.00%
packages/ragbits-core/tests/unit/vector_stores/test_chroma.py                                                   37       0  100.00%
packages/ragbits-core/tests/unit/vector_stores/test_in_memory.py                                                74       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/__init__.py                                         2       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/_main.py                                           70       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/documents/__init__.py                               0       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/documents/document.py                              61       3  95.08%   56, 99, 146
packages/ragbits-document-search/src/ragbits/document_search/documents/element.py                               37       2  94.59%   34, 107
packages/ragbits-document-search/src/ragbits/document_search/documents/exceptions.py                            11       5  54.55%   7-8, 17, 26-27
packages/ragbits-document-search/src/ragbits/document_search/documents/sources.py                              116      16  86.21%   15-16, 116, 129, 212-217, 254-257, 261-262
packages/ragbits-document-search/src/ragbits/document_search/ingestion/__init__.py                               0       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/ingestion/document_processor.py                    28       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/__init__.py                    10       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/base.py                        14       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/dummy.py                       11       1  90.91%   33
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/unstructured/__init__.py        4       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/unstructured/default.py        44       4  90.91%   97, 102-103, 135
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/unstructured/images.py         59      24  59.32%   79-86, 93-113, 125, 138
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/unstructured/pdf.py            19       6  68.42%   23, 35-43
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/unstructured/utils.py          32      11  65.62%   50, 61-62, 77-80, 89, 100-102
packages/ragbits-document-search/src/ragbits/document_search/retrieval/__init__.py                               0       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rephrasers/__init__.py                   15       4  73.33%   39-44
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rephrasers/base.py                        7       1  85.71%   32
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rephrasers/llm.py                        20       9  55.00%   27-28, 45-48, 65-67
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rephrasers/noop.py                        4       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rephrasers/prompts.py                    16       4  75.00%   49-54
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rerankers/__init__.py                    12       1  91.67%   25
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rerankers/base.py                         6       0  100.00%
packages/ragbits-document-search/src/ragbits/document_search/retrieval/rerankers/noop.py                         6       0  100.00%
packages/ragbits-document-search/tests/__init__.py                                                               0       0  100.00%
packages/ragbits-document-search/tests/helpers.py                                                                3       0  100.00%
packages/ragbits-document-search/tests/integration/__init__.py                                                   0       0  100.00%
packages/ragbits-document-search/tests/integration/test_sources.py                                              23      10  56.52%   22-32, 40-45
packages/ragbits-document-search/tests/integration/test_unstructured.py                                         47      10  78.72%   46-52, 65-71
packages/ragbits-document-search/tests/unit/test_document_processor.py                                          17       0  100.00%
packages/ragbits-document-search/tests/unit/test_document_search.py                                             75       0  100.00%
packages/ragbits-document-search/tests/unit/test_documents.py                                                   13       0  100.00%
packages/ragbits-document-search/tests/unit/test_elements.py                                                    15       0  100.00%
packages/ragbits-document-search/tests/unit/test_local_file_source.py                                           13       0  100.00%
packages/ragbits-document-search/tests/unit/test_providers.py                                                   31       0  100.00%
packages/ragbits-document-search/tests/unit/test_source_discriminator.py                                        35       0  100.00%
packages/ragbits-document-search/tests/unit/test_sources.py                                                     25       0  100.00%
TOTAL                                                                                                         2237     188  91.60%

Diff against main

Filename                                                                                                   Stmts    Miss  Cover
-------------------------------------------------------------------------------------------------------  -------  ------  --------
packages/ragbits-core/src/ragbits/core/metadata_stores/__init__.py                                           +12      +3  +75.00%
packages/ragbits-core/src/ragbits/core/metadata_stores/base.py                                                +6       0  +100.00%
packages/ragbits-core/src/ragbits/core/metadata_stores/exceptions.py                                          +4       0  +100.00%
packages/ragbits-core/src/ragbits/core/metadata_stores/in_memory.py                                          +13       0  +100.00%
packages/ragbits-core/src/ragbits/core/vector_stores/__init__.py                                              +2       0  +1.19%
packages/ragbits-core/src/ragbits/core/vector_stores/base.py                                                  +2       0  +100.00%
packages/ragbits-core/src/ragbits/core/vector_stores/chroma.py                                               +10       0  +1.00%
packages/ragbits-core/src/ragbits/core/vector_stores/in_memory.py                                             +1       0  +100.00%
packages/ragbits-core/tests/unit/metadata_stores/__init__.py                                                   0       0  +100.00%
packages/ragbits-core/tests/unit/metadata_stores/test_in_memory.py                                           +22       0  +100.00%
packages/ragbits-core/tests/unit/vector_stores/__init__.py                                                     0       0  +100.00%
packages/ragbits-document-search/src/ragbits/document_search/ingestion/providers/unstructured/images.py       +7      +4  -2.22%
TOTAL                                                                                                        +79      +7  -0.01%

Results for commit: 558df2a

Minimum allowed coverage is 60%

♻️ This comment has been updated with latest results

github-actions · 2024-10-24T08:53:51Z

Trivy scanning results.

.venv/lib/python3.10/site-packages/PyJWT-2.9.0.dist-info/METADATA (secrets)

Total: 1 (MEDIUM: 1, HIGH: 0, CRITICAL: 0)

MEDIUM: JWT (jwt-token)
════════════════════════════════════════
JWT token
────────────────────────────────────────
.venv/lib/python3.10/site-packages/PyJWT-2.9.0.dist-info/METADATA:80
────────────────────────────────────────
78 >>> encoded = jwt.encode({"some": "payload"}, "secret", algorithm="HS256")
79 >>> print(encoded)
80 [ *********************************************************************************************************
81 >>> jwt.decode(encoded, "secret", algorithms=["HS256"])
────────────────────────────────────────

.venv/lib/python3.10/site-packages/litellm/llms/huggingface_llms_metadata/hf_text_generation_models.txt (secrets)

Total: 1 (MEDIUM: 0, HIGH: 0, CRITICAL: 1)

CRITICAL: HuggingFace (hugging-face-access-token)
════════════════════════════════════════
Hugging Face Access Token
────────────────────────────────────────
.venv/lib/python3.10/site-packages/litellm/llms/huggingface_llms_metadata/hf_text_generation_models.txt:36162
────────────────────────────────────────
36160 mncai/Llama2-7B-Active_3rd-floor-LoRA-dim64_epoch4
36161 ajcdp/CM
36162 [ Nagharjun17/*************************************
36163 BigSalmon/InformalToFormalLincoln114Paraphrase
────────────────────────────────────────

.venv/lib/python3.10/site-packages/litellm/proxy/_types.py (secrets)

Total: 1 (MEDIUM: 1, HIGH: 0, CRITICAL: 0)

MEDIUM: Slack (slack-web-hook)
════════════════════════════════════════
Slack Webhook
────────────────────────────────────────
.venv/lib/python3.10/site-packages/litellm/proxy/_types.py:1288
────────────────────────────────────────
1286 alert_to_webhook_url: Optional[Dict] = Field(
1287 None,
1288 [ bhook_url: {'budget_alerts': '*****************************************************************************'}`",
1289 )
────────────────────────────────────────

…ectorstore

packages/ragbits-core/src/ragbits/core/metadata_store/base.py

packages/ragbits-core/src/ragbits/core/vector_stores/chroma.py

packages/ragbits-core/src/ragbits/core/metadata_store/base.py

packages/ragbits-core/src/ragbits/core/vector_stores/chroma.py

...gbits-document-search/src/ragbits/document_search/ingestion/providers/unstructured/images.py

feat: support for different MetadataStores in VectorStore

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konrad-czarnota-ds linked an issue Oct 24, 2024 that may be closed by this pull request

feat: support for different MetadataStores in VectorStore #88

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mhordynski reviewed Oct 24, 2024

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packages/ragbits-core/src/ragbits/core/vector_store/chromadb_store.py Outdated Show resolved Hide resolved

Merge branch 'main' into kc/support-for-different-metadatastores-in-v…

e7d7fc0

…ectorstore

konrad-czarnota-ds added 7 commits October 25, 2024 07:47

Merge branch 'main' into kc/support-for-different-metadatastores-in-v…

ad3a5cc

…ectorstore

Linter fixes

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Merge branch 'main' into kc/support-for-different-metadatastores-in-v…

9f075dd

…ectorstore

Fix ruff

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Merge branch 'main' into kc/support-for-different-metadatastores-in-v…

473b172

…ectorstore

Merge branch 'main' into kc/support-for-different-metadatastores-in-v…

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…ectorstore

Fix linte

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micpst reviewed Oct 29, 2024

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konrad-czarnota-ds requested a review from micpst October 29, 2024 12:05

micpst reviewed Oct 29, 2024

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konrad-czarnota-ds and others added 6 commits October 29, 2024 13:41

Review fixes 2

2dcc00f

Allow to create metadata store from config

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Fix tests

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fixes

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fix tests

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micpst approved these changes Oct 30, 2024

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micpst merged commit c1c019f into main Oct 30, 2024
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micpst deleted the kc/support-for-different-metadatastores-in-vectorstore branch October 30, 2024 01:45

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feat: support for different MetadataStores in VectorStore #144

feat: support for different MetadataStores in VectorStore #144

konrad-czarnota-ds commented Oct 24, 2024

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feat: support for different MetadataStores in VectorStore #144

feat: support for different MetadataStores in VectorStore #144

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konrad-czarnota-ds commented Oct 24, 2024

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github-actions bot commented Oct 24, 2024 • edited Loading

.venv/lib/python3.10/site-packages/PyJWT-2.9.0.dist-info/METADATA (secrets)

.venv/lib/python3.10/site-packages/litellm/llms/huggingface_llms_metadata/hf_text_generation_models.txt (secrets)

.venv/lib/python3.10/site-packages/litellm/proxy/_types.py (secrets)

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