This a repo for manuscript "Differential chromatin accessibility and transcriptional dynamics define breast cancer subtypes and their cells of origin"
Repo structure
-
Fig1: Study Design, Data Collected, and Genomic Alterations.
-
Fig2: Tumor Subtype and Benign Duct Cell Types.
-
Fig3: Subtype-enriched Elements of the Tumor Microenvironment.
-
Fig4: Chromatin Accessibility Evidence for Subtype-specific Cell of Origin.
-
Fig5: Spatial Characterization of Tumor Subtype and Normal Ducts.
-
Fig6: Tumor Lineage-specific Regulators of Gene Expression.
-
Fig7: Differential Markers of Basal-like and Luminal Breast Cancer Lineage.