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54 Open 121 Closed
54 Open 121 Closed
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Issues list

Which BioBERT version is best?
#196 opened Aug 3, 2024 by Asaad-Pak
1
Hope the files can be numbered to guide me in the order of reading.
#195 opened May 11, 2024 by KKKlingyanqiu123
vocab.txt内容是啥，如何进行定义。
#194 opened Apr 29, 2024 by nibaba007
Can the server run BioBERT without a GPU?
#193 opened Sep 18, 2023 by Liwanglili
1
The link of "this tool" is invalid
#191 opened Aug 5, 2023 by happycjksh
1
error :replicating biobert exactly with NCbI dataset
#190 opened Jul 24, 2023 by ayodejioogunseye
1
The Dataset link is invalid
#189 opened May 6, 2023 by Nick0821
6
docker container and example notebook
#187 opened Jan 12, 2023 by skr3178
importing biobert_v1.1_pubmed ERROR 404: Not Found to Colab notebook
#184 opened Dec 3, 2022 by JaskaranKaurGill
2
Split for JNLPBA dataset.
#181 opened Sep 4, 2022 by siddharthtumre
running the relation extraction model
#180 opened Jun 26, 2022 by engineernesma93
1
How to "re-train" BioBert on a custom medical corpus?
#176 opened Apr 17, 2022 by peterphancong
tokenizer.add_tokens() interfers with downstream NER task
#175 opened Apr 7, 2022 by laurens777
Why not filter out the [PAD] tokens when computing loss?
#174 opened Mar 3, 2022 by zdgithub
How to use the RE model after training on GAD? I mean How to load the model and start to use it.??
#173 opened Feb 22, 2022 by uzair-balouch
1
What are the output files in OUTPUT_DIR after fine-tuning BioBERT for NER?
#169 opened Oct 25, 2021 by sbi30
1
Registering at BioASQ website
#167 opened Aug 17, 2021 by parvathysarat
1
For custom RE dataset with entity marked in advanced
#166 opened Aug 17, 2021 by KennyNg-19
1
Issues with tokenizers
#163 opened May 2, 2021 by galsk87
RE datasets
#162 opened Apr 8, 2021 by luana-be
17
Running biobert for pubmed classification on specific text
#161 opened Mar 24, 2021 by cartiksharma286
1
Not able to replicate result available in readme
#160 opened Mar 17, 2021 by Shailendra77
Can BioBERT be used for multilabel classification problem ?
#159 opened Mar 11, 2021 by coolcoder001
3
Provide QA BioASQ previous version
#158 opened Feb 1, 2021 by abdallah197
1
NER: Model pre-trained for BertForTokenClassification task
#156 opened Jan 25, 2021 by mshtelma
ProTip! Exclude everything labeled bug with -label:bug.