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Do not report deprecations for 3rd party libs
Looking at https://download.eclipse.org/eclipse/downloads/drops4/I20241126-0600/apitools/deprecation/apideprecation.html shows deprecations from Apache Commons IO which are irrelevant for the project as API stability for 3rd party libs can not be guaranteed thus add commons-io to the excluded list and pass the list to apitooling.apideprecation ant task.
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