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eric committed Mar 1, 2024
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Showing 1 changed file with 10 additions and 19 deletions.
29 changes: 10 additions & 19 deletions README.md
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Expand Up @@ -14,10 +14,10 @@ Commands:
help Print this message or the help of the given subcommand(s)
Options:
-d, --database <DATABASE> 构建数据库的目录 [default: lib]
-d, --db <DATABASE> 构建数据库的目录 [default: lib]
-n, --num-threads <NUM_THREADS> 下载时的并行大小 [default: 8]
-h, --help Print help (see more with '--help')
-V, --version Print version
-V, --version Print versio
```

```
Expand All @@ -27,24 +27,15 @@ $ ./ncbi gen -h
Usage: ncbi genomes [OPTIONS] --group <GROUP> [COMMAND]
Commands:
md5 仅检查文件的 md5
fna 解析 genomic 文件,并且生成 library fna 文件
help Print this message or the help of the given subcommand(s)
md5 仅检查文件的 md5
fna 解析 genomic 文件,并且生成 library fna 文件
assembly 仅下载和解析 assembly 文件
url 单独下载 genomic 文件,指定 url 地址
help Print this message or the help of the given subcommand(s)
Options:
--site <SITE>
从 NCBI 哪个站点目录下载(RefSeq或GenBank)
[default: refseq]
Possible values:
- genbank: 下载 genbank 资源
- refseq: 下载 refseq 资源
-g, --group <GROUP>
从 NCBI 站点上下载某个种类的数据信息,可以是逗号分隔的多个, archaea,bacteria,viral,fungi,plant,human,protozoa
-h, --help
Print help (see a summary with '-h')
--site <SITE> 从 NCBI 哪个站点目录下载(RefSeq或GenBank) [default: refseq] [possible values: genbank, refseq]
-g, --group <GROUP> 从 NCBI 站点上下载某个种类的数据信息,可以是逗号分隔的多个, archaea,bacteria,viral,fungi,plant,human,protozoa
-h, --help Print help (see more with '--help')
```

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