move affiliation_outcomes.py down in pipeline

- Check files lying in between; none of them uses output from affiliation_outcomes.py
f-hafner · Dec 13, 2022 · 9b57689 · 9b57689
1 parent b255b76
commit 9b57689
Showing 1 changed file with 3 additions and 2 deletions.
diff --git a/src/dataprep/pipeline.sh b/src/dataprep/pipeline.sh
@@ -38,8 +38,6 @@ python3 -m $script_path.prep_mag.read_collab &> $logfile_path/read_collab.log
 
 python3 $script_path/prep_mag/prep_affiliations.py &> $logfile_path/prep_affiliations.log
 
-python3 -m $script_path.prep_mag.affiliation_outcomes &> $logfile_path/affiliation_outcomes.log #note: script_path should omit the / at the end
-
 python3 $script_path/prep_mag/prep_citations.py &> $logfile_path/prep_citations.log
 
 python3 $script_path/prep_mag/paper_outcomes.py &> $logfile_path/paper_outcomes.log
@@ -50,6 +48,9 @@ python3 $script_path/prep_mag/author_info_linking.py --years_first_field 7 \
 python -m $script_path.prep_mag.author_field0 \
     &> $logfile_path/author_field0.log
 
+python3 -m $script_path.prep_mag.affiliation_outcomes &> $logfile_path/affiliation_outcomes.log #note: script_path should omit the / at the end
+
+
 # ## Consolidate gender per author in author_sample 
 python3 $script_path/prep_mag/author_gender.py &> $logfile_path/author_gender.log