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Parallel MPI Debugging with debugpy
Visual Studio code has very advanced visual debugging capabilities using the debugpy
debugger. This also supports parallel debugging with MPI.
You need a one-off workspace configuration in VS Code. From the Run and Debug
tab choose Add Configuration...
and then add the following configurations to launch.json
:
{
"name": "Python Attach 0",
"type": "python",
"request": "attach",
"port": 3000,
"host": "localhost",
},
{
"name": "Python Attach 1",
"type": "python",
"request": "attach",
"port": 3001,
"host": "localhost"
}
If you want to debug more than 2 MPI ranks, add more configurations with corresponding increasing port numbers.
The Python program to be debugged needs the following code added, usually right at the start:
from mpi4py.MPI import COMM_WORLD
import debugpy
debugpy.listen(3000 + COMM_WORLD.rank)
debugpy.wait_for_client()
This causes each MPI process to listen for a debugger on an appropriate port and to block pending the debugger attaching.
Run the program under MPIexec in the usual way. E.g.:
$ mpiexec -n 2 $VIRTUAL_ENV/bin/python myscript.py
The processes should start and pause waiting for the debugger.
In Visual Studio Code, set a breakpoint where you would like execution to pause. Next, launch both (or all of) the Python Attach
debugger configurations. This will show you 2 (or the number of MPI ranks) call stacks. You can switch the debugger between them using the dropdown on the debugger control window. You're now ready to debug!
Building locally
Tips
- Running Firedrake tests with different subpackage branches
- Modifying and Rebuilding PETSc and petsc4py
- Vectorisation
- Debugging C kernels with
lldb
on MacOS - Parallel MPI Debugging with
tmux-mpi
,pdb
andgdb
- Parallel MPI Debugging with VSCode and
debugpy
- Modifying generated code
- Kernel profiling with LIKWID
- breakpoint() builtin not working
- Debugging pytest with multiple processing
Developers Notes
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