Fix: Prevent Reconstruction of Stub Functions in the Output #2823
Workflow file for this run
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| name: "QA" | |
| # Runs on each push and tests flowR for the default configuration. | |
| # Also publishes a pre-release build to npm and updates the documentation with new performance benchmarks. | |
| # Depending on the targets, etc. this may perform a different subset of steps! | |
| 'on': | |
| push: | |
| branches-ignore: | |
| - 'gh-pages' | |
| paths-ignore: | |
| - '**/*.md' | |
| - 'LICENSE' | |
| - '.gitignore' | |
| - 'scripts/**' | |
| pull_request: | |
| types: [ opened, synchronize ] | |
| branches: [ main ] | |
| paths-ignore: | |
| - '**/*.md' | |
| - 'LICENSE' | |
| - '.gitignore' | |
| - 'scripts/**' | |
| workflow_dispatch: | |
| inputs: | |
| force-full: | |
| description: "Force all steps" | |
| required: true | |
| default: false | |
| type: boolean | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| deployments: write | |
| contents: write | |
| jobs: | |
| debug: | |
| name: "🔍 Debug" | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - name: "🛒 Checkout Repository" | |
| uses: actions/checkout@v4 | |
| - name: "🌍 Load Versions to Use" | |
| id: doc-global-versions | |
| run: bash .github/workflows/scripts/global-configuration.sh | |
| - name: "🔍 Debug state" | |
| run: | | |
| echo "::group::Versions" | |
| echo "Node Version: $ACTION_NODE_VERSION" | |
| echo "R Version: $ACTION_R_VERSION" | |
| echo "::endgroup::" | |
| echo "::group::Git Info" | |
| echo "Event: ${{ github.event_name }}" | |
| echo "Ref: ${{ github.ref }}" | |
| echo "Base Ref: ${{ github.base_ref }}" | |
| echo "Head Commit: ${{ github.sha }}" | |
| echo "::endgroup::" | |
| lint: | |
| needs: [ debug ] | |
| name: "👩🏫 Linting (local)" | |
| if: ${{ github.event_name != 'pull_request' || github.event.pull_request.base.ref != 'main' }} | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - name: "🛒 Checkout Repository" | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: "🌍 Load Versions to Use" | |
| id: doc-global-versions | |
| run: bash .github/workflows/scripts/global-configuration.sh | |
| - name: "⬇️ Use Node.js" | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{ env.ACTION_NODE_VERSION }} | |
| registry-url: "https://registry.npmjs.org/" | |
| - name: "👩🏫 Run linter" | |
| run: bash .github/workflows/scripts/run-flowr-command.sh lint-local | |
| test: | |
| needs: [ debug ] | |
| name: "⚗️ Test Suite (coverage)" | |
| if: ${{ github.event_name != 'pull_request' || github.event.pull_request.base.ref != 'main' }} | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - name: "🛒 Checkout Repository" | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: "🌍 Load Versions to Use" | |
| id: doc-global-versions | |
| run: bash .github/workflows/scripts/global-configuration.sh | |
| - name: "⬇️ Use Node.js" | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{ env.ACTION_NODE_VERSION }} | |
| registry-url: "https://registry.npmjs.org/" | |
| - name: "⬇️ Setup R" | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ env.ACTION_R_VERSION }} | |
| - name: "📦 Install R Packages" | |
| shell: Rscript {0} | |
| run: install.packages("xmlparsedata", repos="https://cloud.r-project.org/") | |
| - name: "🧪 Run the Tests" | |
| run: bash .github/workflows/scripts/run-flowr-command.sh "test-full -- --allowOnly=false" | |
| - name: "⬆️ Upload Coverage Reports to Codecov" | |
| if: github.ref == 'refs/heads/main' | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| fail_ci_if_error: true | |
| prerelease: | |
| name: "📦 Prerelease" | |
| runs-on: ubuntu-22.04 | |
| needs: [test] | |
| if: ${{ | |
| github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| && !( | |
| startsWith(github.event.head_commit.message, '[release:minor]') || | |
| startsWith(github.event.head_commit.message, '[release:major]') || | |
| startsWith(github.event.head_commit.message, '[release:patch]') | |
| ) | |
| }} | |
| steps: | |
| - name: "🛒 Checkout Repository" | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| lfs: true | |
| - name: "🌍 Load Versions to Use" | |
| id: doc-global-versions | |
| run: bash .github/workflows/scripts/global-configuration.sh | |
| - name: "⬇️ Use Node.js" | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{ env.ACTION_NODE_VERSION }} | |
| registry-url: "https://registry.npmjs.org/" | |
| - name: "⬇️ Setup R" | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ env.ACTION_R_VERSION }} | |
| - name: "📦 Install R Packages" | |
| shell: Rscript {0} | |
| run: install.packages("xmlparsedata", repos="https://cloud.r-project.org/") | |
| - name: "📦 Install Dependencies" | |
| run: npm ci | |
| - name: "🌟 Prerelease" | |
| run: | | |
| sed -i -e 's/"name":.*"@eagleoutice\/flowr"/"name": "@eagleoutice\/flowr-dev"/g' package.json | |
| npm version 0.0.$(date +'%Y-%m-%d-%H-%M') --no-git-tag-version | |
| rm -rf dist | |
| npm run build | |
| npm run publish-library | |
| env: | |
| NODE_AUTH_TOKEN: ${{ secrets.NPM_PUBLISH_TOKEN }} | |
| performance-test: | |
| needs: [ test ] | |
| name: "⏱️ Performance Test" | |
| # we do not run if the release workflow runs it with pushing | |
| if: ${{ | |
| always() | |
| && !failure() | |
| && (inputs.force-full || (github.event_name == 'push' && github.ref == 'refs/heads/main')) | |
| && !( | |
| startsWith(github.event.head_commit.message, '[release:minor]') || | |
| startsWith(github.event.head_commit.message, '[release:major]') || | |
| startsWith(github.event.head_commit.message, '[release:patch]') | |
| ) | |
| }} | |
| runs-on: ubuntu-22.04 | |
| timeout-minutes: 400 | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| # currently we have a duplication, add your benchmark names here and in `performance-test-upload` | |
| name: ['artificial', 'social-science'] | |
| steps: | |
| - name: "🛒 Checkout Repository" | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: "🌍 Load Versions to Use" | |
| id: doc-global-versions | |
| run: bash .github/workflows/scripts/global-configuration.sh | |
| - name: "⬇️ Use Node.js" | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{ env.ACTION_NODE_VERSION }} | |
| registry-url: "https://registry.npmjs.org/" | |
| - name: "⬇️ Setup R" | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ env.ACTION_R_VERSION }} | |
| - name: "📦 Install R Packages" | |
| shell: Rscript {0} | |
| run: install.packages("xmlparsedata", repos="https://cloud.r-project.org/") | |
| - name: "⏱️ Run the performance benchmarks" | |
| run: bash .github/workflows/scripts/run-flowr-command.sh performance-test -- 1 1 "${{ matrix.name }}" | |
| - name: "⬆️ Upload Benchmark Results" | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: benchmark-results-${{ matrix.name }} | |
| path: test/performance/results/ | |
| performance-test-upload: | |
| name: "⬆️ Upload Performance Test Results" | |
| runs-on: ubuntu-22.04 | |
| needs: [ performance-test ] | |
| steps: | |
| - name: "Checkout Repository" | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| lfs: true | |
| token: ${{ secrets.RELEASE_TOKEN }} | |
| - name: "⬇️ Get benchmark Artifacts (artificial)" | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: benchmark-results-artificial | |
| path: benchmark-ai/ | |
| - name: "⚙️ Name and Email for Git (config) and update" | |
| # we pull just to be totally sure | |
| run: | | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Action" | |
| git pull | |
| # currently we have a duplication, add your benchmark names here and in `performance-test` and check the release.yaml | |
| - name: "🥄 Merge and Produce Performance Results (artificial)" | |
| uses: benchmark-action/github-action-benchmark@v1 | |
| with: | |
| name: '"artificial" Benchmark Suite' | |
| tool: 'customSmallerIsBetter' | |
| output-file-path: benchmark-ai/artificial/artificial-summarized-graph.json | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| fail-on-alert: false | |
| summary-always: false | |
| comment-on-alert: true | |
| comment-always: true | |
| skip-fetch-gh-pages: true | |
| max-items-in-chart: 100 | |
| ref: "refs/heads/main" | |
| gh-repository: ${{ github.repository }} | |
| benchmark-data-dir-path: wiki/stats/benchmark/ | |
| auto-push: false | |
| - name: "⬇️ Get benchmark Artifacts (social-science)" | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: benchmark-results-social-science | |
| path: benchmark-ss/ | |
| - name: "🥄 Merge and Produce Performance Results (social-science)" | |
| uses: benchmark-action/github-action-benchmark@v1 | |
| with: | |
| name: '"social-science" Benchmark Suite' | |
| tool: 'customSmallerIsBetter' | |
| output-file-path: benchmark-ss/social-science/social-science-summarized-graph.json | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| fail-on-alert: false | |
| summary-always: false | |
| comment-on-alert: true | |
| comment-always: true | |
| skip-fetch-gh-pages: true | |
| max-items-in-chart: 100 | |
| ref: "refs/heads/main" | |
| gh-repository: ${{ github.repository }} | |
| benchmark-data-dir-path: wiki/stats/benchmark/ | |
| auto-push: false | |
| deploy-doc: | |
| needs: [ test, performance-test ] | |
| name: "🚀 Build and Deploy Documentation (only on main)" | |
| if: ${{ always() && !failure() && (github.event_name == 'push' && github.ref == 'refs/heads/main') }} | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 15 | |
| concurrency: | |
| group: doc-${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| steps: | |
| - name: "🛒 Checkout Repository" | |
| uses: actions/checkout@v4 | |
| with: | |
| token: ${{ secrets.DOCUMENTATION_TOKEN }} | |
| submodules: true | |
| - name: "🌍 Load Versions to Use" | |
| id: doc-global-versions | |
| run: bash .github/workflows/scripts/global-configuration.sh | |
| - name: "⬇️ Use Node.js" | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{ env.ACTION_NODE_VERSION }} | |
| registry-url: "https://registry.npmjs.org/" | |
| - name: "⬇️ Setup R" | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ env.ACTION_R_VERSION }} | |
| - name: "📦 Install R Packages" | |
| shell: Rscript {0} | |
| run: install.packages("xmlparsedata", repos="https://cloud.r-project.org/") | |
| - name: "🛠️ Build the documentation" | |
| run: bash .github/workflows/scripts/run-flowr-command.sh doc | |
| - name: "⬆️ Push New Documentation" | |
| uses: ad-m/github-push-action@master | |
| with: | |
| branch: gh-pages | |
| github_token: ${{ secrets.DOCUMENTATION_TOKEN }} | |
| force: true |