Updated to silam_v5_9@605474

Some changelog: - ascii2nc: Converter from ascii/grads fields to netcdf - Correcting the fractionation of smoke to size modes (AU) - Got rid of set-unset error in reading observations - Disabled few more unset-error in MPI runs to prevent deadlocks - More rigorous parsing of HYBRID_LAYER and HYBRID_LEVEL attribures from WRF - Meteo stored as layers - few outdated quantities removed - Enable multiple netcdf fire-lists - Enabled full meteo vertical (almost up to 0 Pa) - Hardtop wind diagnostics can be now enabled at any domain top pressure to allow for WRF which can have a hard top at 100 hPa. - Better mapping of CAMS VOCs - Change meteo2disp interpolation to nearest-point (more consistent rains) - Fix for race conditions in grib-grid cache - Compiled by Intel and Visual Studio project (MAS) - Self-degrading passive tracer with definable decay rate (MAS, RK) - Fixes in settling for dd (99% rh over water) - Fraction of ice introduced to dd (neutral change). If missing, ine can use dynamic_meteo_file = TEST_FIELD ice_fract SURFACE_LEVEL 0 - Bugfix pole mass outflow for backward-time simulation - Weakened the check for hybrid layers overlap (enables some WRF setups) - Graceful crash on failure to read boundares - Re-enabled test fields for multitime stack git-svn-id: https://svn.fmi.fi/svn/tie/SILAM/silam_v5_9@605474 250f1e8d-2010-0410-9efa-e22dadc992bd
fmidev · Oct 24, 2024 · 6a98a4d · 6a98a4d
1 parent af62dc1
commit 6a98a4d
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Showing 34 changed files with 894 additions and 1,140 deletions.
diff --git a/build/.gitignore b/build/.gitignore
@@ -1,2 +1,4 @@
 silam_main.*
+ascii_2_nc.*
+frp_main_v2_0.*
 Makefile.branch
diff --git a/build/makefile b/build/makefile
@@ -49,6 +49,9 @@ BOX_MAIN = box_model
 # The main program for grads-grib converter
 GRADS2GRIB_MAIN = grads_2_grib2
 
+# The main program for ascii-nc converter
+ASCII2NC_MAIN = ascii_2_nc
+
 # The main program for is4fires
 IS4FIRES_MAIN = frp_main_v2_0
 
@@ -81,6 +84,11 @@ is4fires : expand config_is4fires last.revision
 	mkdir -p $(OBJDIR) $(BINDIR)	
 	$(MAKE) -f$(BUILDDIR)/makefile.is4fires
 
+ascii2nc: expand config_ascii2nc last.revision
+	mkdir -p $(OBJDIR) $(BINDIR)	
+	$(MAKE) -f$(BUILDDIR)/makefile.ascii2nc
+
+
 
 clean:
 	rm -f $(OBJDIR)*.o $(OBJDIR)*.mod $(BINDIR)$(PROGRAM)
@@ -109,6 +117,12 @@ config_is4fires:
 	rm $(BUILDDIR)/sourcelist
 	@echo Config OK.
 
+config_ascii2nc:
+	ls -1 $(SRCDIR)*.f90 > $(BUILDDIR)/sourcelist
+	perl $(BUILDDIR)/config.pl $(BUILDDIR)/sourcelist $(ASCII2NC_MAIN) $(ARCH) \
+	rm $(BUILDDIR)/sourcelist
+	@echo Config OK.
+
 
 
 tags: $(SRCDIR)*.f90

diff --git a/build/makefile.ascii2nc b/build/makefile.ascii2nc
@@ -0,0 +1,9 @@
+# Build rules for modules
+include $(BUILDDIR)/$(ASCII2NC_MAIN).objects
+$(BINDIR)$(ASCII2NC_MAIN)$(ENDING) : $(COMMON_OBJS)
+	$(F90C) -o $@  $(COMMON_OBJS) $(SILAM_LIBS) $(LFLAGS)
+	chmod 750 $@
+	@echo New $@ is ready
+	cd $(BUILDDIR)
+
+include $(BUILDDIR)/$(ASCII2NC_MAIN).rules.$(RULES)
diff --git a/ini/netcdf_name_table.silam b/ini/netcdf_name_table.silam
@@ -327,6 +327,84 @@ LIST = DEHM_BOUNDARIES
 
 END_LIST = DEHM_BOUNDARIES
 
+###################################################
+LIST = WRF_OUTPUT_HYB
+
+!---------------------------------
+! wrf output
+!---------------------------------
+     time_label_position = instant
+
+     title   = WRF_OUTPUT_HYB
+
+     dim     =     Time     t     Times     char      
+     dim     =     west_east     x     XLONG     *
+     dim     =     south_north     y     XLAT    * 
+     dim     =     bottom_top     z     ZNU     HYBRID_LAYER_WRF
+     dim     =     bottom_top_stag     z   ZNW    HYBRID_LEVEL_WRF
+     dim     =     west_east_stag     x    XLONG_U    * 
+     dim     =     south_north_stag     y     XLAT_V    *
+     dim     =     soil_layers_stag    z  ZS HEIGHT_FROM_SURF #HACK! Only surface needed: depth=0 is the same as height=0
+
+     gridvar =     SINALPHA      sin_map_rot     XXX
+     gridvar =     COSALPHA      cos_map_rot     XXX
+     gridvar =     MAPFAC_MX     dx              XXX
+     gridvar =     MAPFAC_MY     dy              XXX
+     gridvar =     XLONG         lon             XXX
+     gridvar =     XLAT          lat             XXX
+     gridvar =     XLONG_U       lon             XLONG
+     gridvar =     XLAT_U        lat             XLAT
+     gridvar =     XLONG_V       lon             XLONG
+     gridvar =     XLAT_V        lat             XLAT
+     gridvar =     MAPFAC_UX     dx              MAPFAC_MX
+     gridvar =     MAPFAC_UY     dy              MAPFAC_MY
+     gridvar =     MAPFAC_VX     dx              MAPFAC_MX
+     gridvar =     MAPFAC_VY     dy              MAPFAC_MY
+! and now some cheating - claim some random fielde to be map rotations 
+! for staggered grids (only dimensions taken) and force them to be overwritten 
+! by interpolated map rotations of the reference grid
+     gridvar =     XLONG_U       sin_map_rot     SINALPHA
+     gridvar =     XLAT_U        cos_map_rot     COSALPHA
+     gridvar =     XLONG_V       sin_map_rot     SINALPHA
+     gridvar =     XLAT_V        cos_map_rot     COSALPHA
+
+
+     var     =     U          u                          XXX                 -1      XXX     -1     -1     1     0
+     var     =     V          v                          XXX                 -1      XXX     -1     -1     1     0
+!     var     =     W          omega                     XXX                 -1      XXX     -1     -1     1     0
+     var     =     T          perturb_pot_temperature    XXX                 -1      XXX     -1     -1     1     0
+     var     =     QVAPOR     specific_humidity          XXX                 -1      XXX     -1     -1     1     0
+     var     =     QCLOUD     cloud_water                XXX                 -1      XXX     -1     -1     1     0
+     var     =     QICE       cloud_ice                  XXX                 -1      XXX     -1     -1     1     0
+     var     =     CLDFRA     cloud_cover                XXX                 -1      XXX     -1     -1     1     0
+     var     =     T2         temperature_2m             HEIGHT_FROM_SURF     2      XXX     -1     -1     1     0
+     var     =     Q2         specific_humidity_2m       HEIGHT_FROM_SURF     2      XXX     -1     -1     1     0
+     var     =     U10        u_10m                      HEIGHT_FROM_SURF     10     XXX     -1     -1     1     0
+     var     =     V10        v_10m                      HEIGHT_FROM_SURF     10     XXX     -1     -1     1     0
+     var     =     CLDCVR     total_cloud_cover          SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     PSFC       ground_pressure            SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     RAINC      convective_accum_rain      SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     RAINNC     large_scale_accum_rain     SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     LANDMASK   fraction_of_land           SURFACE_LEVEL       -1      XXX     -1     -1     1     0 !(LAND MASK (1 FOR LAND, 0 FOR WATER)
+     var     =     XLAND      fraction_of_land           SURFACE_LEVEL       -1      XXX     -1     -1    -1     2 !LAND MASK (1 FOR LAND, 2 FOR WATER)
+     var     =     HGT        relief_height              SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     SST        water_surface_temp         SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     PBLH       nwp_abl_height_m           SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     HFX        nwp_sensible_heatflux      SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     LH         nwp_latent_heatflux        SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     LAI        lai                        SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+###     var     =     GLW        surf_sw_down_radiation     SURFACE_LEVEL       -1      XXX     -1     -1     1     0 !! Was enabled for for some reason
+     var     =     SWDOWN     surf_sw_down_radiation     SURFACE_LEVEL       -1      XXX     -1     -1     1     0 !! Actual SWDOWN, Thnaks, Ramiro
+     var     =     ALBEDO     albedo                     SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     CLDCVR     total_cloud_cover          SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     ACSNOW     weq_snow_depth             SURFACE_LEVEL       -1      XXX     -1     -1     1e-3     0
+     var     =     SNOW       weq_snow_depth             SURFACE_LEVEL       -1      XXX     -1     -1     1e-3     0
+     var     =     SMOIS      soil_moisture_content      SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+     var     =     AFWA_CAPE  cape                       SURFACE_LEVEL       -1      XXX     -1     -1     1     0
+
+END_LIST = WRF_OUTPUT_HYB
+
+
 ###################################################
 LIST = WRF_OUTPUT
 
@@ -799,7 +877,9 @@ var = hno3 volume_mixing_ratio XXX -1 HNO3 -1 -1 0.4598 0
 var = pan volume_mixing_ratio XXX -1 PAN -1 -1 0.2394 0
 var = ch4 volume_mixing_ratio XXX -1 CH4 -1 -1 1.8106 0
 var = n2o5 volume_mixing_ratio XXX -1 N2O5 -1 -1 0.26852 0
-var = c2h6 volume_mixing_ratio XXX -1 C2H6 -1 -1 0.9657 0
+var = c2h6 volume_mixing_ratio XXX -1 ETHA -1 -1 0.9657 0
+var = c2h4 volume_mixing_ratio XXX -1 ETH -1 -1 1.035 0
+var = c3h8 volume_mixing_ratio XXX -1 C3H8 -1 -1 1.035 0
 var = c5h8 volume_mixing_ratio XXX -1 C5H8 -1 -1 0.4260 0
 var = so2 volume_mixing_ratio XXX -1 SO2 -1 -1 0.4527 0
 

diff --git a/ini/standard_auxillary_cocktails.ini b/ini/standard_auxillary_cocktails.ini
@@ -29,6 +29,18 @@ COCKTAIL_DESCRIPTION_V3_2
   component_fraction = passive   1. 
 END_COCKTAIL_DESCRIPTION
 
+COCKTAIL_DESCRIPTION_V3_2
+  cocktail_name = PASSIVE_AEROSOL_COCKTAIL
+  mass_unit     = kg
+  gas_phase = YES
+  component_fraction = passive  1. 1. 1.     ! Component name and its mass fraction
+#  component_fraction = passive   1.     ! Component name and its mass fraction
+#  component_fraction = passive   1.     ! Component name and its mass fraction
+  aerosol_mode =  1  0.1    1.0  0.3  mkm   1000  kg/m3 
+  aerosol_mode =  2  1.0    2.5  1.5  mkm   1000  kg/m3 
+  mode_distribution_type = FIXED_DIAMETER
+END_COCKTAIL_DESCRIPTION
+
 COCKTAIL_DESCRIPTION_V3_2
   cocktail_name = TIME_COCKTAIL
   mass_unit     = kg

diff --git a/silam_v5_9/_how_to_compile.txt b/silam_v5_9/_how_to_compile.txt
@@ -0,0 +1,9 @@
+In order to compile multi-language, use /iface:cref, either in additional
+options for the Fortran command line tab, or
+Fortran -> External procedures -> Calling Convention -> C, REFERENCE
+
+The basic idea is that all external libraries must be in C convention,
+with lower case and no underscores. Then all goes nice and fluffy. This
+applies also to LAPACK et al, which are FORTRAN codes. They also should be
+set into C convention. A mixture is a way to trouble, although can be tried
+using BIND(C,name="....") if one is brave enough.
diff --git a/silam_v5_9/silam.ini b/silam_v5_9/silam.ini
@@ -7,5 +7,7 @@
 
 #control_file = d:\model\silam_toypoint\toypoint_mpi.control
 
-control_file = d:\project\pollen\reanal_2018\ini\DA_iter_birch.ctrl
+#control_file = d:\project\pollen\reanal_2018\ini\DA_iter_birch.ctrl
+
+control_file = d:\model\silam_v5_9\ini\tst_passive_self_decay.ctrl
 
diff --git a/silam_v5_9/silam_v5_9.sln b/silam_v5_9/silam_v5_9.sln
@@ -1,14 +1,10 @@
 
 Microsoft Visual Studio Solution File, Format Version 12.00
-# Visual Studio Version 16
-VisualStudioVersion = 16.0.30611.23
+# Visual Studio Version 17
+VisualStudioVersion = 17.7.34031.279
 MinimumVisualStudioVersion = 10.0.40219.1
 Project("{6989167D-11E4-40FE-8C1A-2192A86A7E90}") = "silam_v5_9", "silam_v5_9.vfproj", "{B4E65FC4-4B53-4F64-B3D8-98E8746D54E6}"
 EndProject
-Project("{6989167D-11E4-40FE-8C1A-2192A86A7E90}") = "kind_of", "..\kind_of\kind_of.vfproj", "{4D2726C8-13C5-4D01-AE46-73D309AEF12B}"
-EndProject
-Project("{8BC9CEB8-8B4A-11D0-8D11-00A0C91BC942}") = "kind_of_StaticLib", "..\kind_of_StaticLib\kind_of_StaticLib.vcxproj", "{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}"
-EndProject
 Global
 	GlobalSection(SolutionConfigurationPlatforms) = preSolution
 		debug_try|Any CPU = debug_try|Any CPU
@@ -68,80 +64,6 @@ Global
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-		{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|x86.ActiveCfg = Release|Win32
-		{F6DBE87C-1D7B-4040-829D-2BE38E9B9549}.Release|x86.Build.0 = Release|Win32
 	EndGlobalSection
 	GlobalSection(SolutionProperties) = preSolution
 		HideSolutionNode = FALSE