Merge branch 'OSGeo:main' into main

.flake8

@@ -20,56 +20,13 @@ per-file-ignores =
     # F841 local variable assigned to but never used
     # E741 ambiguous variable name 'l'
     __init__.py: F401, F403
-    lib/init/grass.py: E722, F821, F841
-    man/build_check_rest.py: F403, F405
-    man/build_full_index_rest.py: F403, F405
-    man/parser_standard_options.py: F403, F405
-    man/build_class.py: F403, F405
-    man/build_class_rest.py: F403, F405
-    man/build_check.py: F403, F405
-    man/build_full_index.py: F403, F405
-    man/build_index.py: F403, F405
-    man/build_index_rest.py: F403, F405
-    man/build_keywords.py: F403, F405, E722
-    man/build_topics.py: F403, F405, E722
     man/build_html.py: E501
     imagery/i.atcorr/create_iwave.py: F632, F821, W293
-    doc/python/raster_example_ctypes.py: F403, F405
-    doc/python/vector_example_ctypes.py: F403, F405
-    doc/python/m.distance.py: F403, F405, E501
+    doc/python/m.distance.py: E501
     doc/gui/wxpython/example/dialogs.py: F401
-    locale/grass_po_stats.py: E122, E128, E231, E401, E722
     gui/scripts/d.wms.py: E501
-    gui/wxpython/core/gcmd.py: E402
-    gui/wxpython/core/gthread.py: F841
-    gui/wxpython/core/gconsole.py: E722
-    gui/wxpython/core/toolboxes.py: E722
-    gui/wxpython/core/utils.py: E722, F841
-    gui/wxpython/core/workspace.py: E722
-    gui/wxpython/core/render.py: E722, F841
-    gui/wxpython/core/ws.py: F841
-    gui/wxpython/core/settings.py: E722
-    gui/wxpython/core/watchdog.py: E402
-    gui/wxpython/datacatalog/tree.py: E731, E402
-    gui/wxpython/dbmgr/base.py: E722
-    gui/wxpython/dbmgr/dialogs.py: E722
-    gui/wxpython/dbmgr/sqlbuilder.py: E722
-    gui/wxpython/dbmgr/manager.py: E722
-    gui/wxpython/docs/wxgui_sphinx/conf.py: E402, W291
-    gui/wxpython/gcp/g.gui.gcp.py: F841
-    gui/wxpython/gcp/manager.py: F841, E722
-    gui/wxpython/gcp/mapdisplay.py: F841
-    gui/wxpython/gui_core/*: F841, E266, E722
-    gui/wxpython/gui_core/dialogs.py: E722, F841
-    gui/wxpython/gui_core/forms.py: E722, F841
-    gui/wxpython/gui_core/ghelp.py: E722
-    gui/wxpython/gui_core/gselect.py: F841, E266, E722
-    gui/wxpython/gui_core/preferences.py: E266, F841
-    gui/wxpython/gui_core/treeview.py: F841
-    gui/wxpython/gui_core/widgets.py: F841, E722, E266
-    gui/wxpython/image2target/*: F841, E722, E265
-    gui/wxpython/image2target/g.gui.image2target.py: E501, E265, F841
-    gui/wxpython/iscatt/*: F841, E722, F405, F403
+    gui/wxpython/image2target/*: F841, E722
+    gui/wxpython/image2target/g.gui.image2target.py: E501, F841
     gui/wxpython/lmgr/frame.py: F841, E722
     # layertree still includes some formatting issues (it is ignored by Black)
     gui/wxpython/lmgr/layertree.py: E722, E266, W504, E225
@@ -83,8 +40,6 @@ per-file-ignores =
     gui/wxpython/vnet/*: F841
     gui/wxpython/wxgui.py: F841
     gui/wxpython/animation/g.gui.animation.py: E501
-    gui/wxpython/animation/mapwindow.py: F841
-    gui/wxpython/animation/provider.py: F841
     gui/wxpython/tplot/frame.py: F841, E722
     gui/wxpython/tplot/g.gui.tplot.py: E501
     gui/wxpython/rdigit/g.gui.rdigit.py: F841
@@ -170,13 +125,10 @@ per-file-ignores =
     scripts/v.what.strds/v.what.strds.py: E722, E501
     # Line too long (esp. module interface definitions)
     scripts/*/*.py: E501
-    # local variable 'column' is assigned to but never used
     temporal/t.rast.to.vect/t.rast.to.vect.py: E501
-    # local variable 'stdstype' is assigned to but never used
-    temporal/t.vect.algebra/t.vect.algebra.py: F841, E501
+    temporal/t.vect.algebra/t.vect.algebra.py: E501
     # ## used (##% key: r etc)
-    # local variable 'map_list' is assigned to but never used
-    temporal/t.rast.what/t.rast.what.py: E265, E266, F841, E501
+    temporal/t.rast.what/t.rast.what.py: E265, E266, E501
     # Line too long (esp. module interface definitions)
     temporal/*/*.py: E501
 

.github/labeler.yml

@@ -123,9 +123,7 @@ docs:
               - '**/*.png'
               - '**.cff'
               - CITING
-              - CHANGES
               - AUTHORS
-              - NEWS
               - TODO
           - all-globs-to-all-files:
               - '!doc/development/rfc/**'

.github/workflows/additional_checks.yml

@@ -24,7 +24,7 @@ jobs:
 
     steps:
       - name: Checkout repository contents
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           fetch-depth: 31
 

.github/workflows/apt.txt

@@ -7,8 +7,8 @@ libfftw3-dev
 libgdal-dev
 libgl1-mesa-dev
 libglu1-mesa-dev
+liblapacke-dev
 libnetcdf-dev
-libopenblas-dev
 libpdal-dev
 libpng-dev
 libproj-dev

.github/workflows/clang-format-check.yml

@@ -16,7 +16,7 @@ jobs:
     name: Formatting Check
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           persist-credentials: false
       - uses: DoozyX/clang-format-lint-action@c71d0bf4e21876ebec3e5647491186f8797fde31 # v0.18.2

.github/workflows/codeql-analysis.yml

@@ -40,7 +40,7 @@ jobs:
 
     steps:
       - name: Checkout repository
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - name: Set up Python
         uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
         with:
@@ -52,11 +52,11 @@ jobs:
           sudo apt-get install -y wget git gawk findutils
           xargs -a <(awk '! /^ *(#|$)/' ".github/workflows/apt.txt") -r -- \
               sudo apt-get install -y --no-install-recommends --no-install-suggests
-      - uses: rui314/setup-mold@0bf4f07ef9048ec62a45f9dbf2f098afa49695f0 # v1
+      - uses: rui314/setup-mold@b015f7e3f2938ad3a5ed6e5111a8c6c7c1d6db6e # v1
         if: ${{ matrix.language == 'c-cpp' }}
 
       - name: Initialize CodeQL
-        uses: github/codeql-action/init@4dd16135b69a43b6c8efb853346f8437d92d3c93 # v3.26.6
+        uses: github/codeql-action/init@6db8d6351fd0be61f9ed8ebd12ccd35dcec51fea # v3.26.11
         with:
           languages: ${{ matrix.language }}
           config-file: ./.github/codeql/codeql-config.yml
@@ -81,6 +81,6 @@ jobs:
         run: .github/workflows/build_ubuntu-22.04.sh "${HOME}/install"
 
       - name: Perform CodeQL Analysis
-        uses: github/codeql-action/analyze@4dd16135b69a43b6c8efb853346f8437d92d3c93 # v3.26.6
+        uses: github/codeql-action/analyze@6db8d6351fd0be61f9ed8ebd12ccd35dcec51fea # v3.26.11
         with:
           category: "/language:${{matrix.language}}"

.github/workflows/coverity.yml

@@ -17,7 +17,7 @@ jobs:
     runs-on: ubuntu-22.04
     if: github.repository == 'OSGeo/grass'
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
 
       - name: Get dependencies
         run: |

.github/workflows/create_release_draft.yml

@@ -30,7 +30,7 @@ jobs:
       contents: write
     steps:
       - name: Checks-out repository
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           ref: ${{ github.ref }}
           fetch-depth: 0

.github/workflows/docker.yml

@@ -49,7 +49,7 @@ jobs:
 
     steps:
       - name: Checkout
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           fetch-depth: 0
       - name: Docker meta
@@ -68,15 +68,15 @@ jobs:
       - name: Set up QEMU
         uses: docker/setup-qemu-action@49b3bc8e6bdd4a60e6116a5414239cba5943d3cf # v3.2.0
       - name: Set up Docker Buildx
-        uses: docker/setup-buildx-action@988b5a0280414f521da01fcc63a27aeeb4b104db # v3.6.1
+        uses: docker/setup-buildx-action@c47758b77c9736f4b2ef4073d4d51994fabfe349 # v3.7.1
       - name: Login to DockerHub
         uses: docker/login-action@9780b0c442fbb1117ed29e0efdff1e18412f7567 # v3.3.0
         with:
           username: ${{ secrets.DOCKERHUB_USERNAME }}
           password: ${{ secrets.DOCKERHUB_TOKEN  }}
       - name: Build and push
         id: docker_build
-        uses: docker/build-push-action@5cd11c3a4ced054e52742c5fd54dca954e0edd85 # v6.7.0
+        uses: docker/build-push-action@4f58ea79222b3b9dc2c8bbdd6debcef730109a75 # v6.9.0
         with:
           push: true
           pull: true

.github/workflows/gcc.yml

@@ -26,7 +26,7 @@ jobs:
       fail-fast: false
 
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - name: Get dependencies
         run: |
           sudo apt-get update -y

.github/workflows/macos.yml

@@ -44,13 +44,20 @@ jobs:
             -mindepth 1 -maxdepth 1 -type f -print -delete
           # Rehash to forget about the deleted files
           hash -r
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
+      - name: Get current date cache key segment
+        id: date
+        # Year and week of year so cache key changes weekly
+        run: echo "date=$(date +%Y-%U)" >> "${GITHUB_OUTPUT}"
       - name: Setup Mamba
-        uses: mamba-org/setup-micromamba@f8b8a1e23a26f60a44c853292711bacfd3eac822 # v1.9.0
+        uses: mamba-org/setup-micromamba@617811f69075e3fd3ae68ca64220ad065877f246 # v2.0.0
         with:
           init-shell: bash
           environment-file: .github/workflows/macos_dependencies.txt
           environment-name: grass-env
+          # Persist on the same period (date).
+          cache-environment-key: environment-${{ steps.date.outputs.date }}
+
       - name: Environment info
         shell: bash -el {0}
         run: |
@@ -59,17 +66,17 @@ jobs:
       - name: Create installation directory
         run: mkdir $HOME/install
       - name: Build and install
-        shell: bash -l {0}
+        shell: micromamba-shell {0}
         run: source ./.github/workflows/macos_install.sh $HOME/install
       - name: Add the bin directory to PATH
         run: echo "$HOME/install/bin" >> $GITHUB_PATH
       - name: Check installed version
         if: ${{ !cancelled() }}
-        shell: bash -l {0}
+        shell: micromamba-shell {0}
         run: source ./.github/workflows/print_versions.sh
 
       - name: Run pytest with multiple workers in parallel
-        shell: bash -el {0}
+        shell: micromamba-shell {0}
         run: |
           export PYTHONPATH=$(grass --config python_path):$PYTHONPATH
           export LD_LIBRARY_PATH=$(grass --config path)/lib:$LD_LIBRARY_PATH
@@ -78,7 +85,7 @@ jobs:
             -ra . \
             -m 'not needs_solo_run'
       - name: Run pytest with a single worker (for tests marked with needs_solo_run)
-        shell: bash -el {0}
+        shell: micromamba-shell {0}
         run: |
           export PYTHONPATH=$(grass --config python_path):$PYTHONPATH
           export LD_LIBRARY_PATH=$(grass --config path)/lib:$LD_LIBRARY_PATH
@@ -87,7 +94,7 @@ jobs:
             -m 'needs_solo_run'
 
       - name: Run gunittest tests
-        shell: bash -el {0}
+        shell: micromamba-shell {0}
         run: |
           grass --tmp-project XY --exec \
               g.download.project url=${{ env.SampleData }} path=$HOME

.github/workflows/macos_dependencies.txt

@@ -1,4 +1,3 @@
-blas
 cairo
 clangxx_osx-arm64
 clang_osx-arm64
@@ -13,7 +12,6 @@ giflib
 git
 ipython
 krb5
-lapack
 lastools
 libgdal-arrow-parquet
 libgdal-core
@@ -32,6 +30,7 @@ libtiff
 llvm-openmp
 matplotlib
 numpy<2
+openblas
 pandoc
 pdal
 pillow

.github/workflows/macos_gunittest.cfg

@@ -6,25 +6,18 @@
 exclude =
     gui/wxpython/core/testsuite/test_gcmd.py
     gui/wxpython/core/testsuite/toolboxes.sh
-    lib/init/testsuite/test_grass_tmp_mapset.py
-    python/grass/gunittest/testsuite/test_assertions_rast3d.py
     python/grass/gunittest/testsuite/test_assertions_vect.py
-    python/grass/gunittest/testsuite/test_gmodules.py
-    python/grass/gunittest/testsuite/test_gunitest_doctests.py
     python/grass/pygrass/raster/testsuite/test_pygrass_raster_doctests.py
     python/grass/pygrass/rpc/testsuite/test_pygrass_rpc_doctests.py
-    python/grass/script/testsuite/test_script_doctests.py
     python/grass/temporal/testsuite/unittests_temporal_raster_algebra_equal_ts.py
     python/grass/temporal/testsuite/unittests_temporal_raster_conditionals_complement_else.py
     raster/r.in.lidar/testsuite/test_base_resolution.sh
     raster/r.in.pdal/testsuite/test_r_in_pdal_binning.py
     raster/r.in.pdal/testsuite/test_r_in_pdal_selection.py
-    raster/r.terraflow/testsuite/test_r_terraflow.py
     raster/r.sun/testsuite/test_rsun.py
     raster3d/r3.flow/testsuite/r3flow_test.py
-    scripts/g.search.modules/testsuite/test_g_search_modules.py
-    temporal/t.connect/testsuite/test_distr_tgis_db_raster3d.py
     temporal/t.connect/testsuite/test_distr_tgis_db_raster.py
+    temporal/t.connect/testsuite/test_distr_tgis_db_raster3d.py
     temporal/t.connect/testsuite/test_distr_tgis_db_vector.py
     temporal/t.info/testsuite/test.t.info.sh
     temporal/t.rast.aggregate/testsuite/test_aggregation_relative.py

.github/workflows/macos_install.sh

@@ -47,12 +47,8 @@ CONFIGURE_FLAGS="\
   --with-bzlib-libs=${CONDA_PREFIX}/lib \
   --with-bzlib-includes=${CONDA_PREFIX}/include \
   --with-netcdf=${CONDA_PREFIX}/bin/nc-config \
-  --with-blas \
-  --with-blas-libs=${CONDA_PREFIX}/lib \
-  --with-blas-includes=${CONDA_PREFIX}/include \
-  --with-lapack
-  --with-lapack-includes=${CONDA_PREFIX}/include \
-  --with-lapack-libs=${CONDA_PREFIX}/lib \
+  --with-blas=openblas \
+  --with-lapack=openblas \
   --with-netcdf=${CONDA_PREFIX}/bin/nc-config \
   --with-nls \
   --with-libs=${CONDA_PREFIX}/lib \