docs: upgrade the docs to rely on bwa-aln-interactive in bioconda

README.md

@@ -59,4 +59,4 @@ mamba install -c bioconda prymer
 
 See the [developer's instructions][developers-instructions-link] for more information.
 
-[developers-instructions-link]: https://prymer.readthedocs.io/en/latest/installation.html#installation-for-development
+[developers-instructions-link]: https://prymer.readthedocs.io/en/latest/installation-and-developers-documentation.html#installation-for-development

docs/index.md

@@ -4,7 +4,7 @@ Python Primer Design Library
 
 ## Documentation Contents
 
-* [Installation](installation.md)
+* [Installation](installation-and-developers-documentation.md)
 * [Overview](overview.md)
 * [API](reference/prymer/index.md)
 

docs/installation.md → docs/installation-and-developers-documentation.md

@@ -1,4 +1,4 @@
-# Installation
+# Installation and Developer's Documentation
 
 ## Recommended Installation
 
@@ -31,7 +31,7 @@ mamba install -c bioconda prymer
     poetry install
     ```
 
-## Checking the Build
+# Checking the Build
 
 Make sure that [instructions for development work](#getting-setup-for-development-work) have been followed. 
 
@@ -49,15 +49,15 @@ However, `pytest` will neither run the ruff formatter nor apply `ruff`'s automat
 poetry run ruff format && poetry run ruff check --fix
 ```
 
-## Building the Documentation
+# Building the Documentation
 
 Use `mkdocs` to build and serve the documentation.
 
 ```console
 poetry run mkdocs build && poetry run mkdocs serve
 ```
 
-## Creating a Release on PyPi
+# Creating a Release on PyPi
 
 1. Clone the repository recursively and ensure you are on the `main` (un-dirty) branch
 2. Checkout a new branch to prepare the library for release