159 capitalization in paper references #308
Workflow file for this run
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| # Workflow triggered when we have a new release candidate | |
| # This action is adapted from https://github.com/t4d-gmbh/stubbed_versioning | |
| name: On Label Linting and extra checks | |
| on: | |
| pull_request: | |
| types: [ labeled ] | |
| env: | |
| LINT_LABEL_CHECK: 'linting::check' | |
| LINT_LABEL_SUCCESS: 'linting::passed' | |
| LINT_LABEL_FAILURE: 'linting::failed' | |
| URL_LABEL_CHECK: 'URL::check' | |
| URL_LABEL_SUCCESS: 'URL::passed' | |
| URL_LABEL_FAILURE: 'URL::failed' | |
| BUILD_LOC: "./build" | |
| permissions: | |
| packages: read | |
| contents: write | |
| pull-requests: write | |
| repository-projects: write | |
| jobs: | |
| set_target: | |
| # NOTE: Would be nice to not copy it here, however, since env is not accessible | |
| # we would need a prev. job to set it up, which will succeed, leading the | |
| # workflow to be shown as succeeded not skipped | |
| if: ${{ ( github.event.label.name == 'linting::check' ) || ( github.event.label.name == 'URL::check' ) }} | |
| runs-on: ubuntu-latest | |
| outputs: | |
| lint_label: ${{ steps.set_label.outputs.lint_label }} | |
| url_label: ${{ steps.set_label.outputs.url_label }} | |
| steps: | |
| - id: set_label | |
| run: | | |
| echo "lint_label=${{ env.LINT_LABEL_CHECK }}" >> "$GITHUB_OUTPUT" | |
| echo "url_label=${{ env.URL_LABEL_CHECK }}" >> "$GITHUB_OUTPUT" | |
| check_label_exist: | |
| needs: | |
| - set_target | |
| runs-on: ubuntu-latest | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| OWNER: ${{ github.repository_owner }} | |
| REPO: ${{ github.event.repository.name }} | |
| permissions: | |
| pull-requests: write | |
| contents: write | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # NOTE: would be nicer to not re-define them here, however env is not | |
| # evaluated > would need to go thour the output of a previous job | |
| label: | |
| - 'linting::check' | |
| - 'linting::passed' | |
| - 'linting::failed' | |
| - 'URL::check' | |
| - 'URL::passed' | |
| - 'URL::failed' | |
| steps: | |
| - name: Assert labels ${{ matrix.label }} is defined | |
| run: | | |
| gh label create ${{ matrix.label }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| continue-on-error: true # make sure the next steps run also on failure | |
| lint_project: | |
| if: ${{ ( github.event.label.name == needs.set_target.outputs.lint_label ) }} | |
| needs: | |
| - set_target | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| - name: Install lintr | |
| run: install.packages("lintr") | |
| shell: Rscript {0} | |
| - name: Lint root directory | |
| run: lintr::lint_dir(linters=lintr::with_defaults(line_length_linter=NULL, infix_spaces_linter=NULL, trailing_whitespace_linter=NULL)) | |
| shell: Rscript {0} | |
| env: | |
| LINTR_ERROR_ON_LINT: true | |
| report_lint: | |
| if: ${{ ( success() || failure() ) }} | |
| needs: | |
| - lint_project | |
| - check_label_exist | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| repository-projects: write | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| OWNER: ${{ github.repository_owner }} | |
| REPO: ${{ github.event.repository.name }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Report the linting status by label | |
| run: | | |
| gh pr edit ${{ env.EVENT }} --remove-label ${{ env.LINT_LABEL_CHECK }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| if [ ${{ needs.lint_project.result }} == "success" ]; then | |
| gh pr edit ${{ env.EVENT }} --remove-label ${{ env.LINT_LABEL_FAILURE }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| gh pr edit ${{ env.EVENT }} --add-label ${{ env.LINT_LABEL_SUCCESS }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| echo "### ${{ github.event.label.url }} passed! :rocket:" >> $GITHUB_STEP_SUMMARY | |
| exit 0 | |
| elif [ ${{ needs.lint_project.result }} == "failure" ]; then | |
| gh pr edit ${{ env.EVENT }} --remove-label ${{ env.LINT_LABEL_SUCCESS }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| gh pr edit ${{ env.EVENT }} --add-label ${{ env.LINT_LABEL_FAILURE }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| echo "### ${{ github.event.label.url }} failed!" >> $GITHUB_STEP_SUMMARY | |
| exit 1 | |
| else | |
| gh pr edit ${{ env.EVENT }} --add-label ${{ env.LINT_LABEL_CHECK }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| echo "On demand task outcome was ${{ needs.lint_project.outcome }}" | |
| fi | |
| shell: bash | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| EVENT: ${{ github.event.number }} # This is either the issue or pr | |
| URL_check: | |
| runs-on: ubuntu-latest | |
| if: ${{ (github.event.label.name == needs.set_target.outputs.url_label ) }} | |
| needs: | |
| - set_target | |
| name: Run URL checks | |
| # runs-on: ubuntu-latest | |
| container: | |
| image: ${{ vars.CONTAINER_SOURCE }}/${{ vars.CONTAINER_RELEASE || 'debian/gcc/release' }}/abn:${{ vars.CONTAINER_VERSION || 'latest' }} | |
| credentials: | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Disable renv | |
| run: | | |
| renv::deactivate() | |
| shell: Rscript {0} | |
| - name: Check for broken urls and redirects | |
| run: | | |
| library(urlchecker) | |
| uc=url_check("./") | |
| print(uc) | |
| # uc=url_check("./");print(uc);print(uc$Status); if(any(uc$Status=="Error") || any(uc$Status=="403")) {q("no", status=1, FALSE)} | |
| shell: Rscript {0} | |
| report_URL_check: | |
| needs: | |
| - URL_check | |
| - check_label_exist | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| repository-projects: write | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| OWNER: ${{ github.repository_owner }} | |
| REPO: ${{ github.event.repository.name }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Check if on demand tasks succeeded | |
| #TODO: Properly establish what has failead and what not | |
| run: | | |
| gh pr edit ${{ env.EVENT }} --remove-label ${{ env.URL_LABEL_CHECK }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| if [ ${{ needs.URL_check.result }} == "success" ]; then | |
| gh pr edit ${{ env.EVENT }} --remove-label ${{ env.URL_LABEL_FAILURE }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| gh pr edit ${{ env.EVENT }} --add-label ${{ env.URL_LABEL_SUCCESS }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| echo "### ${{ github.event.label.url }} passed! :rocket:" >> $GITHUB_STEP_SUMMARY | |
| exit 0 | |
| elif [ ${{ needs.URL_check.result }} == "failure" ]; then | |
| gh pr edit ${{ env.EVENT }} --remove-label ${{ env.URL_LABEL_SUCCESS }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| gh pr edit ${{ env.EVENT }} --add-label ${{ env.URL_LABEL_FAILURE }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| echo "### ${{ github.event.label.url }} failed!" >> $GITHUB_STEP_SUMMARY | |
| exit 1 | |
| else | |
| gh pr edit ${{ env.EVENT }} --add-label ${{ env.URL_LABEL_CHECK }} --repo ${{ env.OWNER }}/${{ env.REPO }} | |
| echo "On demand task outcome was ${{ needs.URL_check.outcome }}" | |
| fi | |
| shell: bash | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| EVENT: ${{ github.event.number }} # This is either the issue or pr | |
| record_passed_label: | |
| runs-on: ubuntu-latest | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| OWNER: ${{ github.repository_owner }} | |
| REPO: ${{ github.event.repository.name }} | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| repository-projects: write | |
| outputs: | |
| passed: ${{ steps.passed.outputs.PASSED}} | |
| steps: | |
| - name: Check if the pull request is labeled with ${{ env.URL_LABEL_SUCCESS }} # 2 | |
| id: passed | |
| run: | | |
| if $( gh pr view ${{ env.EVENT }} --repo ${{ env.OWNER }}/${{ env.REPO }} --json "labels" --jq ".[].[].name" | grep --quiet ${{ env.URL_LABEL_SUCCESS }}); then | |
| echo "PASSED=true" >> $GITHUB_OUTPUT | |
| else | |
| echo "PASSED=false" >> $GITHUB_OUTPUT | |
| fi | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| EVENT: ${{ github.event.number }} # This is either the issue or pr | |
| URL_passed: | |
| if: ${{ always() }} | |
| needs: | |
| - URL_check | |
| - record_passed_label | |
| runs-on: ubuntu-latest | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| OWNER: ${{ github.repository_owner }} | |
| REPO: ${{ github.event.repository.name }} | |
| steps: | |
| - name: Assert that either checks passed on the label is present | |
| run: | | |
| if [[ ${{ needs.URL_check.result }} == 'success' || ${{ needs.record_passed_label.outputs.passed }} == 'true' ]]; then | |
| echo 'URL status ok'; | |
| else exit 1; fi | |
| # NOTE: Currently for the linting there is not check that passes if the label linting::passed is present |