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small fix in manhattanPlot to highlight only the exact aberrant genes
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ischeller committed Jun 20, 2023
1 parent 0e33db9 commit c74d724
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1 change: 1 addition & 0 deletions R/method-plot.R
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Expand Up @@ -1430,6 +1430,7 @@ plotManhattan.OUTRIDER <- function(object, sampleID, value="pvalue",
color = chrColor,
highlight.gr = gr[which(gr$aberrant == TRUE)],
highlight.col = 'firebrick',
highlight.overlap = 'equal',
use.genome.coords=is.null(chr)) +
labs(x="Chromosome", y = value, title=main, subtitle=subtitle)

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