some cleanup

galaxy-genome-annotation · Oct 31, 2019 · 29ad946 · 29ad946
1 parent 134900a
commit 29ad946
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Showing 2 changed files with 2 additions and 4 deletions.
diff --git a/bootstrap_apollo.sh b/bootstrap_apollo.sh
@@ -3,14 +3,12 @@
 export GALAXY_SHARED_DIR=`pwd`/apollo_shared_dir
 mkdir -p "$GALAXY_SHARED_DIR"
 
-docker pull quay.io/gmod/apollo:latest
 docker run --memory=4g -d -it -p 8888:8080 -v `pwd`/apollo_shared_dir/:`pwd`/apollo_shared_dir/ quay.io/gmod/apollo:latest
 
 echo "[BOOTSTRAP] Waiting while Apollo starts up..."
 # Wait for apollo to be online
 for ((i=0;i<30;i++))
 do
-    echo $i
     APOLLO_UP=$(arrow users get_users 2> /dev/null | head -1 | grep '^\[$' -q; echo "$?")
 	if [[ $APOLLO_UP -eq 0 ]]; then
 		break

diff --git a/test/remote_test.py b/test/remote_test.py
@@ -45,7 +45,7 @@ def test_update_organism(self):
 
         org_info = wa.organisms.show_organism('temp_org')
 
-        meta = '{"bla": "bli"}'
+        meta = {"bla": "bli"}
 
         with tempfile.NamedTemporaryFile(suffix='.tar.gz') as archive:
             with tarfile.open(archive.name, mode="w:gz") as tar:
@@ -66,7 +66,7 @@ def test_update_organism(self):
 
     def test_add_organism(self):
 
-        meta = '{"bla": "bli"}'
+        meta = {"bla": "bli"}
 
         with tempfile.NamedTemporaryFile(suffix='.tar.gz') as archive:
             with tarfile.open(archive.name, mode="w:gz") as tar: