add tests for org seq update

bootstrap_apollo.sh

@@ -52,6 +52,8 @@ cp -r test-data/dataset_1_files/data/ "${GALAXY_SHARED_DIR}/org1"
 cp -r test-data/dataset_1_files/data/ "${GALAXY_SHARED_DIR}/org2"
 cp -r test-data/dataset_1_files/data/ "${GALAXY_SHARED_DIR}/org3"
 cp -r test-data/dataset_1_files/data/ "${GALAXY_SHARED_DIR}/org4"
+cp -r test-data/dataset_2_files/data/ "${GALAXY_SHARED_DIR}/org_update_newseq"
+cp -r test-data/dataset_3_files/data/ "${GALAXY_SHARED_DIR}/org_update_changedseq"
 arrow organisms add_organism --genus Testus --species organus test_organism $GALAXY_SHARED_DIR/org1
 arrow organisms add_organism --genus Foo --species barus alt_org $GALAXY_SHARED_DIR/org2
 arrow organisms add_organism --genus Foo3 --species barus org3 $GALAXY_SHARED_DIR/org3

test-data/dataset_2_files/data/.htaccess

@@ -0,0 +1,10 @@
+# This Apache .htaccess file is generated by JBrowse (GenomeDB) for
+# allowing cross-origin requests as defined by the Cross-Origin
+# Resource Sharing working draft from the W3C
+# (http://www.w3.org/TR/cors/).  In order for Apache to pay attention
+# to this, it must have mod_headers enabled, and its AllowOverride
+# configuration directive must allow FileInfo overrides.
+<IfModule mod_headers.c>
+    Header onsuccess set Access-Control-Allow-Origin *
+    Header onsuccess set Access-Control-Allow-Headers X-Requested-With,Range
+</IfModule>

test-data/dataset_2_files/data/names/02b/9.json

@@ -0,0 +1 @@
+{"merli":{"prefix":["Merlin"],"exact":[]}}

test-data/dataset_2_files/data/names/044/6.json

@@ -0,0 +1 @@
+{"an":{"exact":[],"prefix":["Anotherseq"]}}

test-data/dataset_2_files/data/names/0e7/d.json

@@ -0,0 +1 @@
+{"anotherseq":{"exact":[["Anotherseq",null,"Anotherseq",null,0,4730,null]],"prefix":[]}}

test-data/dataset_2_files/data/names/0e9/3.json

@@ -0,0 +1 @@
+{"mer":{"prefix":["Merlin"],"exact":[]}}

test-data/dataset_2_files/data/names/343/8.json

@@ -0,0 +1 @@
+{"another":{"prefix":["Anotherseq"],"exact":[]}}

test-data/dataset_2_files/data/names/42e/5.json

@@ -0,0 +1 @@
+{"ano":{"prefix":["Anotherseq"],"exact":[]}}

test-data/dataset_2_files/data/names/5ea/1.json

@@ -0,0 +1 @@
+{"anothers":{"prefix":["Anotherseq"],"exact":[]}}

test-data/dataset_2_files/data/names/6b1/d.json

@@ -0,0 +1 @@
+{"anot":{"exact":[],"prefix":["Anotherseq"]}}

test-data/dataset_2_files/data/names/787/a.json

@@ -0,0 +1 @@
+{"anotherse":{"exact":[],"prefix":["Anotherseq"]}}

test-data/dataset_2_files/data/names/83f/8.json

@@ -0,0 +1 @@
+{"merlin":{"exact":[["Merlin",null,"Merlin",null,0,172788,null]],"prefix":[]}}

test-data/dataset_2_files/data/names/92c/2.json

@@ -0,0 +1 @@
+{"me":{"prefix":["Merlin"],"exact":[]}}

test-data/dataset_2_files/data/names/be4/3.json

@@ -0,0 +1 @@
+{"a":{"exact":[],"prefix":["Anotherseq"]}}

test-data/dataset_2_files/data/names/cf0/e.json

@@ -0,0 +1 @@
+{"merl":{"exact":[],"prefix":["Merlin"]}}

test-data/dataset_2_files/data/names/e7d/1.json

@@ -0,0 +1 @@
+{"anothe":{"prefix":["Anotherseq"],"exact":[]}}

test-data/dataset_2_files/data/names/f05/5.json

@@ -0,0 +1 @@
+{"anoth":{"prefix":["Anotherseq"],"exact":[]}}

test-data/dataset_2_files/data/names/f26/8.json

@@ -0,0 +1 @@
+{"m":{"prefix":["Merlin"],"exact":[]}}

test-data/dataset_2_files/data/names/meta.json

@@ -0,0 +1 @@
+{"format":"json","compress":0,"hash_bits":16,"lowercase_keys":1,"track_names":[]}