update ruff

.pre-commit-config.yaml

@@ -16,7 +16,7 @@ repos:
       - id: trailing-whitespace
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: "v0.7.4"
+    rev: "v0.8.0"
     hooks:
       - id: ruff
         args: [--fix, --exit-non-zero-on-fix]

gplugins/__init__.py

@@ -20,4 +20,4 @@ class Paths:
 
 PATH = Paths()
 
-__all__ = ["plot", "get_effective_indices", "port_symmetries"]
+__all__ = ["get_effective_indices", "plot", "port_symmetries"]

gplugins/devsim/__init__.py

@@ -16,12 +16,12 @@
 logger.info(f"DEVSIM {tcad.__version__!r} installed at {tcad.__path__!r}")
 
 __all__ = [
-    "dn_carriers",
-    "dalpha_carriers",
-    "alpha_to_k",
-    "k_to_alpha",
-    "PINWaveguide",
     "DDComponent",
+    "PINWaveguide",
+    "alpha_to_k",
     "clear_devsim_cache",
+    "dalpha_carriers",
+    "dn_carriers",
+    "k_to_alpha",
 ]
 __version__ = "0.0.1"

gplugins/femwell/__init__.py

@@ -2,4 +2,4 @@
 
 from .mode_solver import compute_component_slice_modes, compute_cross_section_modes
 
-__all__ = ("compute_cross_section_modes", "compute_component_slice_modes")
+__all__ = ("compute_component_slice_modes", "compute_cross_section_modes")

gplugins/gmeep/__init__.py

@@ -42,20 +42,20 @@
     "get_meep_adjoint_optimizer",
     "get_simulation",
     "get_sparameters_data_meep",
+    "plot",
+    "port_symmetries",
     "run_meep_adjoint_optimizer",
+    "write_sparameters_grating",
+    "write_sparameters_grating_batch",
+    "write_sparameters_grating_mpi",
     "write_sparameters_meep",
     "write_sparameters_meep_1x1",
     "write_sparameters_meep_1x1_bend90",
-    "write_sparameters_meep_mpi",
-    "write_sparameters_meep_mpi_1x1",
-    "write_sparameters_meep_mpi_1x1_bend90",
     "write_sparameters_meep_batch",
     "write_sparameters_meep_batch_1x1",
     "write_sparameters_meep_batch_1x1_bend90",
-    "write_sparameters_grating",
-    "write_sparameters_grating_mpi",
-    "write_sparameters_grating_batch",
-    "plot",
-    "port_symmetries",
+    "write_sparameters_meep_mpi",
+    "write_sparameters_meep_mpi_1x1",
+    "write_sparameters_meep_mpi_1x1_bend90",
 ]
 __version__ = "0.0.3"

gplugins/gmsh/__init__.py

@@ -17,17 +17,17 @@
 from gplugins.gmsh.xy_xsection_mesh import xy_xsection_mesh
 
 __all__ = [
+    "create_physical_mesh",
     "get_layer_overlaps_z",
     "get_layers_at_z",
+    "get_mesh",
     "get_u_bounds_layers",
     "get_u_bounds_polygons",
     "get_uz_bounds_layers",
-    "get_mesh",
     "list_unique_layer_stack_z",
     "map_unique_layer_stack_z",
     "order_layer_stack",
     "uz_xsection_mesh",
     "xy_xsection_mesh",
-    "create_physical_mesh",
 ]
 __version__ = "0.0.2"

gplugins/lumerical/__init__.py

@@ -11,7 +11,7 @@
 
 __all__ = [
     "read_sparameters_lumerical",
+    "run_wavelength_sweep",
     "write_sparameters_lumerical",
     "write_sparameters_lumerical_components",
-    "run_wavelength_sweep",
 ]

gplugins/modes/__init__.py

@@ -20,16 +20,16 @@
 )
 
 __all__ = [
-    "find_modes_waveguide",
-    "find_modes_coupler",
-    "find_neff_vs_width",
-    "find_mode_dispersion",
+    "coupler",
     "find_coupling_vs_gap",
+    "find_mode_dispersion",
+    "find_modes_coupler",
+    "find_modes_waveguide",
     "find_neff_ng_dw_dh",
+    "find_neff_vs_width",
+    "plot_coupling_vs_gap",
     "plot_neff_ng_dw_dh",
     "plot_neff_vs_width",
-    "plot_coupling_vs_gap",
-    "coupler",
     "waveguide",
 ]
 __version__ = "0.0.2"

gplugins/sax/__init__.py

@@ -3,4 +3,4 @@
 from gplugins.sax import models, read
 from gplugins.sax.plot_model import plot_model
 
-__all__ = ["read", "plot_model", "models"]
+__all__ = ["models", "plot_model", "read"]

gplugins/tidy3d/__init__.py

@@ -16,13 +16,13 @@
 
 __all__ = [
     "Tidy3DComponent",
+    "get_simulation_grating_coupler",
     "material_name_to_medium",
-    "modes",
     "materials",
-    "get_simulation_grating_coupler",
+    "modes",
+    "plot_simulation",
     "write_sparameters",
     "write_sparameters_batch",
     "write_sparameters_grating_coupler",
     "write_sparameters_grating_coupler_batch",
-    "plot_simulation",
 ]

notebooks/tcad_02_analytical_process.ipynb

@@ -30,7 +30,14 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "\n",
-    "from gplugins.process.implant_tables import *"
+    "from gplugins.process.diffusion import D, silicon_diffused_gaussian_profile\n",
+    "from gplugins.process.implant_tables import (\n",
+    "    depth_in_silicon,\n",
+    "    silicon_gaussian_profile,\n",
+    "    silicon_skewed_gaussian_profile,\n",
+    "    skew_in_silicon,\n",
+    "    straggle_in_silicon,\n",
+    ")"
    ]
   },
   {
@@ -87,7 +94,6 @@
     "energies = [20, 40, 60, 80, 100, 120, 140, 160]\n",
     "z = np.linspace(0, 0.25, 1000)\n",
     "\n",
-    "import matplotlib.pyplot as plt\n",
     "\n",
     "lower_lim = 0\n",
     "for E in energies:\n",
@@ -146,7 +152,6 @@
     "energies = [20, 40, 60, 80, 100, 120, 140, 160]\n",
     "z = np.linspace(0, 0.25, 1000)\n",
     "\n",
-    "import matplotlib.pyplot as plt\n",
     "\n",
     "lower_lim = 0\n",
     "for E in energies:\n",
@@ -187,16 +192,6 @@
    "id": "12",
    "metadata": {},
    "outputs": [],
-   "source": [
-    "from gplugins.process.diffusion import *"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "id": "13",
-   "metadata": {},
-   "outputs": [],
    "source": [
     "Ts = np.linspace(800, 1100, 100)\n",
     "\n",
@@ -211,7 +206,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "14",
+   "id": "13",
    "metadata": {},
    "source": [
     "In this low-doping regime, the diffusivity can be taken as constant, and there exist an analytical solution for initially Gaussian doping profiles:"
@@ -220,7 +215,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "15",
+   "id": "14",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -249,15 +244,15 @@
   },
   {
    "cell_type": "markdown",
-   "id": "16",
+   "id": "15",
    "metadata": {},
    "source": [
     "This can be extended to many dimensions."
    ]
   },
   {
    "cell_type": "markdown",
-   "id": "17",
+   "id": "16",
    "metadata": {},
    "source": [
     "### Concentration-dependent diffusion\n",
@@ -268,7 +263,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "18",
+   "id": "17",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -287,7 +282,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "19",
+   "id": "18",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -303,7 +298,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "20",
+   "id": "19",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -319,7 +314,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "21",
+   "id": "20",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -334,7 +329,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "22",
+   "id": "21",
    "metadata": {},
    "source": [
     "The most generic solution considers the local forms of these concentration-dependent diffusivities for the diffusion equation of each dopant, as well as the electrostatic potential, in a finite-element scheme."
@@ -346,6 +341,23 @@
    "cell_metadata_filter": "-all",
    "main_language": "python",
    "notebook_metadata_filter": "-all"
+  },
+  "kernelspec": {
+   "display_name": "base",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.11.8"
   }
  },
  "nbformat": 4,

notebooks/tcad_03_numerical_implantation.ipynb

@@ -267,6 +267,9 @@
    "cell_metadata_filter": "-all",
    "main_language": "python",
    "notebook_metadata_filter": "-all"
+  },
+  "language_info": {
+   "name": "python"
   }
  },
  "nbformat": 4,