How to create a new release

how to create a new release

1. check that the version is up to date and tests are OK

   git pull
   python tests/run_tests.py -vv
   

2. create a new branch

   git co -b branch_X.X.X
   

3. bump version
   • in integron_finder.__init__.py
   • commit the file
4. generate the doc (html and pdf)

   cd doc
   make html
   make latexpdf
   

5. add new singularity file using the new release and add it to repos

   git add singularity/Singularity.X.X.X
   git commit -m "add singularity definition file for release X.X.X"
   

6. fix docker file using the new release

   git add docker/Dockerfile
   git commit -m "use release X.X.X in docker"
   

7. create a new tag

   git tag vX.X.X
   

8. create the source distribution python setup.py sdist
9. upload the new release
   • on pypy:

     twine upload dist/integron_finder-x.x.x.tar.gz
     

   • on pypytest:

   twine upload --repository-url https://test.pypi.org/legacy/ dist/integron_finder-x.x.x.tar.gz
   

10. push the tag

    git push origin <tag_name>
    

11. build and push the docker image

        cd docker
        docker login --username=yourhubusername
        docker build -f Dockerfile.ext -t gempasteur/integron_finder:tagname .
        docker push gempasteur/integron_finder:tagname
    

12 check if Singularity image is building https://www.singularity-hub.org/collections/1314