Add docker-build
action to take advantage of caching and use sharding
#906
Workflow file for this run
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name: CI Tests | |
on: [push, pull_request] | |
jobs: | |
test: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
shard: [1, 2, 3, 4, 5] | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v2 | |
- name: Set up JDK 11 | |
uses: actions/setup-java@v2 | |
with: | |
java-version: '11' | |
distribution: 'adopt' | |
- name: Setup Nextflow ${{ matrix.nextflow }} | |
uses: nf-core/setup-nextflow@v1 | |
with: | |
version: "latest-edge" | |
- name: Install nf-test | |
run: | | |
wget -qO- https://code.askimed.com/install/nf-test | bash -s 0.9.0-rc2 | |
sudo mv nf-test /usr/local/bin/ | |
- name: Set up Docker Buildx | |
uses: docker/setup-buildx-action@v3 | |
- name: Build Docker | |
uses: docker/build-push-action@v5 | |
with: | |
context: . | |
push: false | |
load: true | |
tags: "genepi/nf-gwas" | |
cache-from: type=gha | |
cache-to: type=gha,mode=max | |
- name: Run Tests (Shard ${{ matrix.shard }}/${{ strategy.job-total }}) | |
run: nf-test test --ci --shard ${{ matrix.shard }}/${{ strategy.job-total }} |