0.13.9

Features

n/a

Improvements

• upgrade to globi-lib v0.26.6 to pickup most recent datasets (or dataset configurations) deposited with Zenodo. globalbioticinteractions/globalbioticinteractions#1017

Bugs

n/a

0.13.8

Features

n/a

Improvements

• upgrade to globi-lib v0.26.5 to work towards addressing globalbioticinteractions/globalbioticinteractions#999
• make cache dir configurable; globalbioticinteractions/globalbioticinteractions#999

Bugs

n/a

0.13.7

Features

n/a

Improvements

• upgrade to globi-lib v0.26.4 to help address globalbioticinteractions/globalbioticinteractions#999
• add ability to do streaming reviews, in addition to streaming interaction/name records.

example of creating streaming reports -

using single line globi.json file:

{ "namespace": "hash://sha256/9cd053d40ef148e16389982ea16d724063b82567f7ba1799962670fc97876fbf", "citation": "hash://sha256/9cd053d40ef148e16389982ea16d724063b82567f7ba1799962670fc97876fbf", "format": "dwca", "url": "https://linker.bio/hash://sha256/9cd053d40ef148e16389982ea16d724063b82567f7ba1799962670fc97876fbf" }

to stream review records via

echo globi.json | elton stream --record-type review > review.tsv

Bugs

n/a

0.13.6

Features

• introduce [elton stream] to help stream all interactions from a versioned GBIF/iDigBio graph Big-Bee-Network/bif#1 and https://github.com/Big-Bee-Network/bif .
  example usage:

using single line globi.json file:

{ "namespace": "hash://sha256/9cd053d40ef148e16389982ea16d724063b82567f7ba1799962670fc97876fbf", "citation": "hash://sha256/9cd053d40ef148e16389982ea16d724063b82567f7ba1799962670fc97876fbf", "format": "dwca", "url": "https://linker.bio/hash://sha256/9cd053d40ef148e16389982ea16d724063b82567f7ba1799962670fc97876fbf" }

to do

echo globi.json | elton stream > interactions.tsv

Note that multi-line json would stream many datasets into the same interactions.tsv .

Improvements

• upgrade to globi-lib v0.26.2

Bugs

n/a

0.13.4

Features

n/a

Improvements

• upgrade to globi-lib v0.26.0 related to globalbioticinteractions/globalbioticinteractions#982 for support of primaryKey/foreignKey relations across tables of an interaction dataset.

Bugs

n/a

0.13.3

Features

n/a

Improvements

• upgrade to preston 0.7.8; related to #52
• add "track" as alias for update/pull/sync
• Bump xalan:xalan from 2.7.2 to 2.7.3
• update to globi libs v0.25.17

Bugs

n/a

0.13.2

Features

n/a

Improvements

n/a

Bugs

• update to globi libs v0.25.16 to help address #58

0.13.1

Features

n/a

Improvements

n/a

Bugs

• update to globi libs v0.25.15 to help address #57

0.13.0

Features

• new command elton log to log datasets resources in "Preston" speak using the PROV/PAV ontologies. Related to #52 .
• new command elton cat to stream dataset resources using their content hashes (aka sha256 hash) related to #52

Example - Calculate size of dataset resources.

# get template dataset
elton pull globalbioticinteractions/template-dataset
# calculate size of resources associated with the template dataset
elton log | elton cat | pv -b > /dev/null

yielding:

9.44KiB

Improvements

n/a

Bugs

n/a

0.12.13

Features

n/a

Improvements

• upgrade to globi libs v0.25.14
• upgrade to preston lib v0.7.7

Bugs

n/a