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Issues list

Update R version at next AMI rebuild
#78 opened Mar 23, 2024 by obigriffith
Add fgsea enrichment plot to Pathway analysis section
#77 opened Nov 16, 2023 by obigriffith
stringtie_expression_matrix
#68 opened Mar 13, 2023 by gp519c
3
Expand practical exercises to cover DE, DE visualization and pathway analysis
#56 opened Nov 10, 2021 by malachig
2
Create a gallery page of visualizations related to the course
#55 opened Nov 10, 2021 by malachig
Create a docker image with all tools used by this course
#43 opened Nov 23, 2020 by malachig
2
Expunge all Perl from the course
#42 opened Nov 19, 2020 by malachig
1
Integrate Kallisto section with the other tools
#41 opened Nov 14, 2020 by kcotto
Update figures for fpkm visualizations
#36 opened Jun 13, 2019 by kcotto
Update DE section
#35 opened Jun 13, 2019 by kcotto
Update integrated assignment
#33 opened May 8, 2019 by malachig
@kcotto
1
Update the alternative splicing module to provide an alternative analysis workflow to StringTie/Ballgown
#30 opened Mar 18, 2019 by kcotto
1
Identify more interesting data sets to use for the alternative splicing module
#27 opened Mar 18, 2019 by kcotto
Improve Expression/Differential expression lectures
#23 opened Mar 18, 2019 by kcotto
Add a fusion detection section
#21 opened Mar 18, 2019 by kcotto
1
Add documentation to detailed cloud tutorial to provide some better security practices
#20 opened Mar 18, 2019 by kcotto
Update data sets on the MGI FTP site
#14 opened Mar 18, 2019 by kcotto
4
DE analysis improvements
#13 opened Mar 18, 2019 by kcotto
Install docs improvements
#12 opened Mar 18, 2019 by kcotto
3
ProTip! no:milestone will show everything without a milestone.