chore: Update .gitignore to include tests/ directory and fix update p… #57
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: CI | |
| on: | |
| push: | |
| branches: [master] | |
| tags: | |
| - v* | |
| pull_request: | |
| branches: [master, dev] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| python-version: ["3.9", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Check commit type | |
| if: '!contains(github.ref, ''tags'')' | |
| id: check-type | |
| run: | | |
| COMMIT_MSG=$(git log --format=%B -n 1 ${{ github.event.after }}) | |
| COMMIT_TYPE=$(echo $COMMIT_MSG | cut -d' ' -f1 | tr -d ':') | |
| echo "Commit type is '$COMMIT_TYPE'" | |
| echo "type=$COMMIT_TYPE" >> "$GITHUB_OUTPUT" | |
| - name: Check if tests should be skipped | |
| if: '!contains(github.ref, ''tags'')' | |
| id: check-skip | |
| run: | | |
| COMMIT_TYPE=${{ steps.check-type.outputs.type }} | |
| SKIP_TYPES=("docs" "refactor" "style" "chore") | |
| if [[ " ${SKIP_TYPES[@]} " =~ " ${COMMIT_TYPE} " ]]; then | |
| echo "Skipping tests..." | |
| echo "skip=true" >> "$GITHUB_OUTPUT" | |
| else | |
| echo "Running tests..." | |
| echo "skip=false" >> "$GITHUB_OUTPUT" | |
| fi | |
| - name: Set up Python ${{ matrix.python-version }} | |
| if: steps.check-skip.outputs.skip != 'true' | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Openslide global dependencies | |
| if: steps.check-skip.outputs.skip != 'true' | |
| run: | | |
| sudo apt update | |
| sudo apt-get install -y libopenslide-dev openslide-tools libopenjp2-7 libopenjp2-tools | |
| - name: Print Version Information | |
| if: steps.check-skip.outputs.skip != 'true' | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Load cached venv if cache exists | |
| if: steps.check-skip.outputs.skip != 'true' | |
| id: cached-poetry-dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: .venv | |
| key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/poetry.lock') }} | |
| - name: Install Poetry | |
| if: steps.check-skip.outputs.skip != 'true' | |
| uses: snok/install-poetry@v1 | |
| - name: Install dependencies if cache does not exist | |
| if: steps.check-skip.outputs.skip != 'true' && steps.cached-poetry-dependencies.outputs.cache-hit != 'true' | |
| run: poetry install --extras "emb" | |
| - name: Tests | |
| if: steps.check-skip.outputs.skip != 'true' | |
| run: poetry run pytest | |
| deploy: | |
| needs: [build] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| - name: Install Openslide global dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt-get install -y libopenslide-dev openslide-tools libopenjp2-7 libopenjp2-tools | |
| - name: Print Version Information | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Load cached venv if cache exists | |
| id: cached-poetry-dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: .venv | |
| key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/poetry.lock') }} | |
| - name: Install Poetry | |
| uses: snok/install-poetry@v1 | |
| - name: Install dependencies if cache does not exist | |
| if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true' | |
| run: poetry install --extras "emb" | |
| - name: Deploy doc | |
| run: poetry run mkdocs gh-deploy --force | |
| publish: | |
| needs: [build] | |
| if: contains(github.ref, 'tags') | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build and publish to pypi | |
| uses: JRubics/[email protected] | |
| with: | |
| python_version: "3.10" | |
| pypi_token: ${{ secrets.PYPI_TOKEN }} |