remaking intro slides for the new calendar of GDK workshops

hds-sandbox · Sep 18, 2024 · c0baf3a · c0baf3a
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diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
@@ -21,11 +21,20 @@ jobs:
       - name: Set up Quarto
         uses: quarto-dev/quarto-actions/setup@v2
 
-      - name: Install R
-        uses: r-lib/actions/setup-r@v2
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.10' 
+
+      - name: Set up jupyterlab and jupyterquiz
+        run: pip install jupyterlab jupyterquiz
+
+
+#      - name: Install R
+#        uses: r-lib/actions/setup-r@v2
 
-      - name: Install R Dependencies
-        uses: r-lib/actions/setup-renv@v2
+#      - name: Install R Dependencies
+#        uses: r-lib/actions/setup-renv@v2
 
 
 #      - name: Install pandoc

diff --git a/resources/Slides/Introduction/Removed_for_now.qmd.backup b/resources/Slides/Introduction/Removed_for_now.qmd.backup
@@ -1,3 +1,10 @@
+```{python}
+#| echo: false
+from jupyterquiz import display_quiz
+git_url='https://raw.githubusercontent.com/hds-sandbox/scverse-2024-workshop/main/Questions/quiz00.json'
+display_quiz(git_url, 1, shuffle_answers=True)
+```
+
 ## Access from VSCode
 
 An **IDE** (Integrated Development Environment) is an interface from which you can edit files, use the terminal, write code. You might now IDEs such as Rstudio (very dedicated to R and python) and jupyterlab (for basically any language).

diff --git a/resources/Slides/Introduction/img/account.png b/resources/Slides/Introduction/img/account.png
diff --git a/resources/Slides/Introduction/img/complexTree.png b/resources/Slides/Introduction/img/complexTree.png
diff --git a/resources/Slides/Introduction/img/treeStructure.png b/resources/Slides/Introduction/img/treeStructure.png
diff --git a/resources/Slides/Introduction/questions/paths copy.json b/resources/Slides/Introduction/questions/paths copy.json
@@ -0,0 +1,28 @@
+[
+    {
+        "question": "Which paths are correct in the file system above?",
+        "type": "many_choice",
+        "answers": [
+            {
+                "answer": "/home/project/",
+                "correct": false,
+                "feedback": "`project` is not in the home directory"
+            },
+            {
+                "answer": "/home/username/coolProject",
+                "correct": true,
+                "feedback": "Yes!"
+            },
+            {
+                "answer": "/",
+                "correct": true,
+                "feedback": "The very root directory!"
+            },
+            {
+                "answer": "/project/coolProject/data/human.bam",
+                "correct": false,
+                "feedback": "No, you do not know from which root directory this path starts"
+            }
+        ]
+    }
+]