BioAT

the Bioinformatic Analysis Tools

Introduction

bioat, a python package & command line toolkit for Bioinformatics and data science!

Installation

# supported platform: Linux / MacOS (intel & arm64) / Windows
pip install --upgrade bioat
# or via conda / mamba / microconda / micromamba
# eg:
conda install -c conda-forge bioat

usage

# list commands
bioat list
# check version
bioat version
# check information about bioat
bioat about

# example usage
bioat bam remove_clip --help
samtools view -h test_sorted_n.bam | bioat bam remove_clip | tail

circos plot

about author

author: 赵华男 | Huanan Herman Zhao

email: [email protected]

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