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Mixed error/exception response from CEDAR tsv validation #1563

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BirdMachine opened this issue Feb 17, 2025 · 0 comments

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BirdMachine commented Feb 17, 2025

In SenNet, it is possible to get a response that includes both row-by-row data errors alongside exceptions.

Verify if hubmap's Ingest API acts similarly
if so, update the error handling to account for this

See https://github.com/hubmapconsortium/ingest-api/blob/main/src/app.py#L2367C39-L2367C53

(Cannot attach tsvs to github issues, so test file includes a bonus .txt at the end of the filename which can be deleted)

contributors_copy_2.tsv.txt

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