All .Rd files were analised to find out wheter the calls to 'dontrun'…

… could be changed to 'donttest'. Hower, it was not apossible in any case. Inparticluar, it was not possible for the follwowing .Rd files: plot_ParamsPerIter, plot_NparOF, lhoat, hydroPSO, ReadPlot_GofPerParticle, ReadPlot_out, ReadPlot_convergence, ReadPlot_params, ReadPlot_particles, ReadPlot_results, read_best
hzambran · Jul 13, 2024 · 011c813 · 011c813
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diff --git a/man/ReadPlot_convergence.Rd b/man/ReadPlot_convergence.Rd
@@ -1,7 +1,7 @@
 %% File ReadPlot_convergence.R
 %% Part of the hydroPSO R package, http://www.rforge.net/hydroPSO/ ; 
 %%                                 http://cran.r-project.org/web/packages/hydroPSO
-%% Copyright 2011-2012 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
+%% Copyright 2011-2024 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
 %% Distributed under GPL 2 or later
 
 \name{ReadPlot_convergence}

diff --git a/man/ReadPlot_out.Rd b/man/ReadPlot_out.Rd
@@ -1,7 +1,7 @@
 %% File ReadPlot_out.Rd
 %% Part of the hydroPSO R package, http://www.rforge.net/hydroPSO/ ; 
 %%                                 http://cran.r-project.org/web/packages/hydroPSO
-%% Copyright 2011-2012 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
+%% Copyright 2011-2024 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
 %% Distributed under GPL 2 or later
 
 \name{ReadPlot_out}

diff --git a/man/ReadPlot_params.Rd b/man/ReadPlot_params.Rd
@@ -1,7 +1,7 @@
 %% File ReadPlot_params.Rd
 %% Part of the hydroPSO R package, http://www.rforge.net/hydroPSO/ ; 
 %%                                 http://cran.r-project.org/web/packages/hydroPSO
-%% Copyright 2008-2012 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
+%% Copyright 2008-2024 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
 %% Distributed under GPL 2 or later
 
 \name{ReadPlot_params}

diff --git a/man/ReadPlot_particles.Rd b/man/ReadPlot_particles.Rd
@@ -1,7 +1,7 @@
 %% File ReadPlot_particles.Rd
 %% Part of the hydroPSO R package, http://www.rforge.net/hydroPSO/ ; 
 %%                                 http://cran.r-project.org/web/packages/hydroPSO
-%% Copyright 2011-2012 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
+%% Copyright 2011-2024 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
 %% Distributed under GPL 2 or later
 
 \name{ReadPlot_particles}

diff --git a/man/ReadPlot_results.Rd b/man/ReadPlot_results.Rd
@@ -1,7 +1,7 @@
 %% File ReadPlot_Results.R
 %% Part of the hydroPSO R package, http://www.rforge.net/hydroPSO/ ; 
 %%                                 http://cran.r-project.org/web/packages/hydroPSO
-%% Copyright 2010-2012 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
+%% Copyright 2010-2024 Mauricio Zambrano-Bigiarini & Rodrigo Rojas
 %% Distributed under GPL 2 or later
 
 \name{ReadPlot_results}
@@ -316,7 +316,7 @@ Mauricio Zambrano-Bigiarini, \email{[email protected]}
 \code{\link{hydroPSO}}, \code{\link{read_best}}, \code{\link{read_particles}}, \code{\link{read_velocities}}, \code{\link{read_out}}, \code{\link{read_convergence}}, \code{\link{read_GofPerParticle}}, \code{\link{plot_ParamsPerIter}}
 }
 \examples{
-\dontrun{
+\donttest{
 # Setting the user home directory as working directory
 setwd("~")
 

diff --git a/man/hydroPSO-package.Rd b/man/hydroPSO-package.Rd
@@ -25,12 +25,12 @@ At the same time, hydroPSO includes 4 different topologies (random, von Neumann,
 \tabular{ll}{
 Package: \tab hydroPSO\cr
 Type: \tab Package\cr
-Version: \tab 0.5-1\cr
-Date: \tab 2020-04-28\cr
+Version: \tab 0.6-0\cr
+Date: \tab 2024-07-15\cr
 License: \tab GPL (>=2)\cr
 LazyLoad: \tab yes\cr
-Packaged: \tab Tue Apr 28 19:26:53 -04 2020; MZB \cr
-BuiltUnder: \tab R version 3.6.3 (2020-02-29) -- "Holding the Windsock"; x86_64-pc-linux-gnu (64-bit)\cr
+Packaged: \tab Tue Jul 15 19:26:53 -04 2024; MZB \cr
+BuiltUnder: \tab R version  4.4.0 (2024-04-24) -- "Puppy Cup"; aarch64-apple-darwin20
 }
 %%~~ An overview of how to use the package, including the most important functions ~~
 }
@@ -54,8 +54,8 @@ Maintainer: Mauricio Zambrano-Bigiarini <[email protected]>
 \seealso{
 %%~~ Optional links to other man pages, e.g. ~~
 %%\code{\link[hydroGOF:hydroGOF]{<pkg>}}
-\url{http://www.rforge.net/hydroGOF/} \cr
-\url{http://www.rforge.net/hydroTSM/}
+\url{https://github.com/hzambran/hydroGOF} \cr
+\url{https://github.com/hzambran/hydroTSM}
 }
 %%\examples{
 %%~~ simple examples of the most important functions ~~

diff --git a/man/hydroPSO2pest.Rd b/man/hydroPSO2pest.Rd
@@ -44,11 +44,6 @@ character, with the name of the output \sQuote{.pst} file
   \item{verbose}{
 logical, indicates if progress messages are to be printed. By default \code{verbose=TRUE}
 }
-
-
-%%  \item{\dots}{
-%%     ~~Describe \code{\dots} here~~
-%%}
 }
 %%\details{
 %%  ~~ If necessary, more details than the description above ~~

diff --git a/man/hydromod.Rd b/man/hydromod.Rd
@@ -139,7 +139,7 @@ Mauricio Zambrano-Bigiarini, \email{[email protected]}
 %% ~Make other sections like Warning with \section{Warning }{....} ~
 
 \seealso{
-\code{\link{hydroPSO}}
+\code{\link{hydroPSO}}, \code{\link{hydromodInR}}
 }
 %%\examples{
 %%}

diff --git a/man/hydromodInR.Rd b/man/hydromodInR.Rd
@@ -63,7 +63,7 @@ Mauricio Zambrano-Bigiarini, \email{[email protected]}
 %% ~Make other sections like Warning with \section{Warning }{....} ~
 
 \seealso{
-\code{\link{hydroPSO}}
+\code{\link{hydroPSO}}, \code{\link{hydromod}}
 }
 %%\examples{
 %%}

diff --git a/man/plot_2parOF.Rd b/man/plot_2parOF.Rd
@@ -71,10 +71,6 @@ logical, indicates whether the legend has to be drawn or not
   \item{key.space}{
 character, position of the legend with respect to the plot
 }
-
- %% \item{verbose}{
-%%     ~~Describe \code{file} here~~
-%%}
 }
 %%\details{
 %%  ~~ If necessary, more details than the description above ~~

diff --git a/man/verification.Rd b/man/verification.Rd
@@ -75,9 +75,6 @@ logical, indicates if the output files will be written to the disk
   \item{verbose}{
 logical, if TRUE progress messages are printed
 }
-%%  \item{\dots}{
-%%     ~~Describe \code{\dots} here~~
-%%}
   }
 }
 %%\details{