Automated template update from cookiecutter-scverse (#64)

* Automated template update from cookiecutter-scverse * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * fix merge conflict Co-authored-by: grst <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Gregor Sturm <[email protected]>
icbi-lab · Dec 12, 2022 · af48e80 · af48e80
1 parent bab74f1
commit af48e80
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Showing 5 changed files with 9 additions and 4 deletions.
diff --git a/.cruft.json b/.cruft.json
@@ -1,6 +1,6 @@
 {
     "template": "https://github.com/scverse/cookiecutter-scverse",
-    "commit": "28f47a97470826ca5000df24fd272e0d32d1c6fa",
+    "commit": "c96cadaa981a71113cc97ada8e5085188ed22ed7",
     "context": {
         "cookiecutter": {
             "project_name": "infercnvpy",
@@ -19,5 +19,5 @@
         }
     },
     "directory": null,
-    "checkout": "v0.0.3"
+    "checkout": "v0.1.1"
 }
diff --git a/docs/_templates/autosummary/class.rst b/docs/_templates/autosummary/class.rst
@@ -38,6 +38,7 @@ Attributes
 ~~~~~~~~~~~
 
 {% for item in attributes %}
+
 {{ item }}
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
@@ -54,6 +55,7 @@ Methods
 
 {% for item in methods %}
 {%- if item != '__init__' %}
+
 {{ item }}
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 

diff --git a/docs/conf.py b/docs/conf.py
@@ -21,7 +21,7 @@
 author = info["Author"]
 copyright = f"{datetime.now():%Y}, {author}."
 version = info["Version"]
-repository_url = "https://github.com/" + "grst" + "/" + project_name
+repository_url = f"https://github.com/grst/{project_name}"
 
 # The full version, including alpha/beta/rc tags
 release = info["Version"]
@@ -53,6 +53,7 @@
     "sphinxcontrib.bibtex",
     "sphinx_autodoc_typehints",
     "sphinx.ext.mathjax",
+    "IPython.sphinxext.ipython_console_highlighting",
     *[p.stem for p in (HERE / "extensions").glob("*.py")],
 ]
 

diff --git a/docs/developer_docs.md b/docs/developer_docs.md
@@ -193,7 +193,8 @@ In addition to the packages needed to _use_ this package, you need additional py
 the documentation_. It's easy to install them using `pip`:
 
 ```bash
-pip install "infercnvpy[dev,test,doc]"
+cd infercnvpy
+pip install -e ".[dev,test,doc]"
 ```
 
 ### Code-style

diff --git a/pyproject.toml b/pyproject.toml
@@ -32,6 +32,7 @@ dependencies = [
     'pyreadr',
     # for debug logging (referenced from the issue template)
     "session-info",
+    "ipython"
 ]
 
 [project.optional-dependencies]