Merge pull request #28 from icgc-argo/[email protected].…

…2-1.3.2

[release]

.gitignore

@@ -70,3 +70,5 @@ docs/_build
 work
 outdir
 trace.txt*
+
+wfpr_modules/github.com/*/*/*/tests

demo-dna-seq-processing-wf/main.nf

@@ -24,7 +24,7 @@
 
 nextflow.enable.dsl = 2
 name = 'dna-seq-processing'
-version = '1.7.1-1.3.1'
+version = '1.7.2-1.3.2'
 
 
 params.ref_genome_fa = ""
@@ -70,9 +70,9 @@ DnaAln_params = [
 include {
     getSecondaryFiles;
     cleanupWorkdir as cleanup
-} from './wfpr_modules/github.com/icgc-argo/demo-wfpkgs/demo-utils@1.1.0/main.nf'
-include { DnaAln } from './wfpr_modules/github.com/icgc-argo/demo-wfpkgs/demo-dna-seq-alignment-wf@1.6.0/main.nf' params(DnaAln_params)
-include { alignedSeqQC } from './wfpr_modules/github.com/icgc-argo/demo-wfpkgs/demo-aligned-seq-qc@1.0.0/aligned-seq-qc.nf' params(params)
+} from './wfpr_modules/github.com/icgc-argo/demo-wfpkgs/demo-utils@1.2.0/main.nf'
+include { DnaAln } from './wfpr_modules/github.com/icgc-argo/demo-wfpkgs/demo-dna-seq-alignment-wf@1.7.2/main.nf' params(DnaAln_params)
+include { alignedSeqQC } from './wfpr_modules/github.com/icgc-argo/demo-wfpkgs/demo-aligned-seq-qc@1.1.0/aligned-seq-qc.nf' params(params)
 
 
 workflow DnaSeqProcess {

demo-dna-seq-processing-wf/pkg.json

@@ -1,6 +1,6 @@
 {
     "name": "demo-dna-seq-alignment-wf",
-    "version": "1.7.1-1.3.1",
+    "version": "1.7.2-1.3.2",
     "description": "DNA Seq Alignment Workflow with QC Metrics Collection",
     "main": "main.nf",
     "scripts": {
@@ -21,7 +21,7 @@
     },
     "dependencies": [
         "github.com/icgc-argo/demo-wfpkgs/[email protected]",
-        "github.com/icgc-argo/demo-wfpkgs/[email protected].1",
+        "github.com/icgc-argo/demo-wfpkgs/[email protected].2",
         "github.com/icgc-argo/demo-wfpkgs/[email protected]"
     ],
     "devDependencies": [],
@@ -34,4 +34,4 @@
     "license": "AGPL-3.0",
     "bugReport": "https://github.com/icgc-argo/demo-wfpkgs/issues",
     "homepage": "https://github.com/icgc-argo/demo-wfpkgs#readme"
-}
+}