Features
The package has been working for real examples (models) for a while, it can
- convert a set of SBtab files to
- vfgen's format,
- NEURON's nmodl format
- SBML
- perform model reduction through conservation laws
- calculate the stoichiometry
Restrictions
The SBtab files must have exactly one table per TSV file (the standard allows multiple tables to be in the same TSV file). The standard permits the tables to be in EXCEL's file format, which we don't permit. But we do accept ODS files as long as R's ods import package works.
Known Issues
The package is inconsistent about whether it uses the !ID column of SBtab or the !Name column to find items in the tables. This will be carefully fixed in later versions.