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Showing results

Successful Job Applications and Grants

736 130 Updated Jan 2, 2025

Gene cluster comparison figure generator

Python 554 69 Updated Nov 25, 2024

ALF artificial life simulator

TeX 4 1 Updated Apr 27, 2020

A JBrowse plugin to view multiple alignment format (MAF) files

JavaScript 26 4 Updated Oct 25, 2023

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

C++ 531 168 Updated Sep 4, 2024

a minimal C++ interval tree implementation

C++ 230 70 Updated Mar 11, 2021

alignment to variation graph inducer

C++ 145 18 Updated Feb 12, 2025

Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules

Python 84 26 Updated Jun 19, 2018

jobTree based python wrapper to run the genome simulation tool suite Evolver

Python 9 1 Updated Apr 27, 2012

Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.

C++ 65 17 Updated Oct 29, 2020

A Variant Call Format reader for Python.

Python 410 198 Updated Sep 22, 2023

Rolling Hash C++ Library

C++ 188 33 Updated Mar 14, 2024