Code for the Inclusion Network Manuscript

Author: Yuanxi Fu (GitHub ID: yuanxiesa)

File Description

Final

Code for the published version
Fu, Y., Clarke, C. V., Van Moer, M., & Schneider, J. (2024). Exploring evidence selection with the inclusion network. Quantitative Science Studies, 5(1), 219–245. https://doi.org/10.1162/qss_a_00287

file_description.md in the folder contains descriptions for all the scripts.

how to run the code in Final

1. download "Final" folder to your computer
2. set your working directory to "Final"
3. under the folder "Final" create a folder call "data"
4. under "data" create a folder called "ExRx" and a folder called "salt"
5. download both the ExRx dataset and the salt controversy dataset
6. put the files into "ExRx" and "salt" respectively
7. Rstudio should remind you to install all dependencies. You can also source "Final_functions.R." If you want to install the dependencies mannually, check the top of Final_function.R.
8. run the code

R1

Code for R1 preprint: Fu, Y., Clarke, C. V., Van Moer, M., & Schneider, J. (2022). Exploring Evidence Selection with the Inclusion Network. MetaArXiv. https://doi.org/10.31222/osf.io/zh9vp
file_description.md in the folder contains descriptions for all the scripts.

PreR1

Code for a PreR1 preprint preprint: Fu, Y., Clarke, C. V., Van Moer, M., & Schneider, J. (2022). Exploring Evidence Selection with the Inclusion Network. MetaArXiv. https://doi.org/10.31222/osf.io/zh9vp Preprint V2

Original

Code fo the original submission Fu, Y., Clarke, C. V., Van Moer, M., & Schneider, J. (2022). Exploring Evidence Selection with the Inclusion Network. MetaArXiv. https://doi.org/10.31222/osf.io/zh9vp preprint V1

Where to find the data

The ExRx inclusion network V4

Clarke, C., Lischwe Mueller, N., Joshi, M. B., Fu, Y., & Schneider, J. (2023). The inclusion network of 27 review articles published between 2013-2018 investigating the relationship between physical activity and depressive symptoms [Dataset]. University of Illinois at Urbana-Champaign Databank. https://doi.org/10.13012/B2IDB-4614455_V4

The salt controversy inclusion network V3

Fu, Yuanxi; Hsiao, Tzu-Kun; Joshi, Manasi Ballal; Lischwe Mueller, Natalie (2023): The Salt Controversy Systematic Review Reports and Primary Study Reports Network Dataset . University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-6128763_V3