docker & ruff: bumping python version

*ref: cern-sis/issues-inspire/issues/588

.github/workflows/build-and-release.yml

@@ -15,17 +15,17 @@ jobs:
     runs-on: ubuntu-20.04
     steps:
       - name: Checkout
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
 
       - name: Install dependencies
         run: sudo apt-get update && sudo apt-get install poppler-utils
 
-      - name: Set up Python 3.8
-        uses: actions/setup-python@v2
+      - name: Set up Python 3.11
+        uses: actions/setup-python@v4
         with:
-          python-version: 3.8
+          python-version: 3.11
 
       - name: Install python dependencies
         run: |
@@ -52,7 +52,7 @@ jobs:
     if: github.event_name == 'push' && github.ref == 'refs/heads/master'
     steps:
       - name: Checkout
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
       - name: Pre-commit check

Dockerfile

@@ -1,4 +1,4 @@
-FROM python:3.8
+FROM python:3.11-slim-buster
 RUN apt update && apt install poppler-utils -y
 COPY setup.py setup.cfg README.rst ./
 COPY refextract refextract/

refextract/references/api.py

@@ -152,7 +152,8 @@ def extract_references_from_file(path,
         extracted_texkeys_urls = extract_texkeys_and_urls_from_pdf(path)
         if len(extracted_texkeys_urls) == len(parsed_refs):
             parsed_refs_updated = []
-            for ref, ref_texkey_urls in zip(parsed_refs, extracted_texkeys_urls):
+            for ref, ref_texkey_urls in zip(parsed_refs, extracted_texkeys_urls,
+                                            strict=False):
                 update_reference_with_urls(ref, ref_texkey_urls.get('urls', []))
                 if ref.get('url'):
                     ref['url'] = dedupe_list(ref['url'])

ruff.toml

@@ -1,4 +1,4 @@
-target-version = "py38"
+target-version = "py311"
 [lint.flake8-tidy-imports]
 ban-relative-imports = "all"
 

setup.py

@@ -46,10 +46,10 @@
 tests_require = [
     'flake8-future-import~=0.0,>=0.4.4',
     'flake8~=3.0,>=3.5.0',
-    'pytest-cov~=2.0,>=2.10',
-    'pytest~=4.0,>=4.6',
+    'pytest-cov~=5.0',
+    'pytest~=8.0.0',
     'responses~=0.0,>=0.8.1',
-    'mock>=4.0.3'
+    'mock~=5.1.0'
 ]
 
 extras_require = {

tests/test_kbs.py

@@ -42,7 +42,7 @@ def test_get_kbs_caches_journal_dict():
     # the cache is reused, so identity of the cache elements doesn't change
     assert all(
         cached_first is cached_second for (cached_first, cached_second)
-        in zip(first_cache["journals"], second_cache["journals"])
+        in zip(first_cache["journals"], second_cache["journals"], strict=False)
     )
 
 
@@ -55,7 +55,7 @@ def test_get_kbs_invalidates_cache_if_input_changes():
     # the cache is invalidated, so identity of the cache elements changes
     assert all(
         cached_first is not cached_second for (cached_first, cached_second)
-        in zip(first_cache["journals"], second_cache["journals"])
+        in zip(first_cache["journals"], second_cache["journals"], strict=False)
     )
     assert len(second_cache["journals"]) == 3
     assert second_cache["journals"][-1] == ["JOURNAL OF TESTING", "J TEST"]