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updated tree_d3.html
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l-singh-biomsu authored Oct 30, 2024
1 parent a122a52 commit 05b237c
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions CURATED_SET/html/tree_d3.html
Original file line number Diff line number Diff line change
Expand Up @@ -309,7 +309,7 @@ <h1>Multiple sequence alignment will appear below</h1>

var m = msa({
el: rootDiv,
importURL: "../draft_seeds/"+name.replace(/[()]/g, '')+".fasta",
importURL: "../seeds/"+name.replace(/[()]/g, '')+".fasta",
// seqs:seqs,
all: true,
vis: {
Expand Down Expand Up @@ -400,7 +400,7 @@ <h1>Multiple sequence alignment will appear below</h1>

//Now we will add consensus with features
//first we need to get features and load them.
xhr("../draft_seeds/"+name.replace(/[()]/g, '')+".gff3", function(err, request, body) {
xhr("../seeds/"+name.replace(/[()]/g, '')+".gff3", function(err, request, body) {
var features = gffParser.parseSeqs(body);
m.seqs.addFeatures(features);

Expand All @@ -421,7 +421,7 @@ <h1>Multiple sequence alignment will appear below</h1>
}
m.seqs.unshift(seqc);
//After that we add a tree
m.importURL("../draft_seeds/"+name.replace(/[()]/g, '')+".tree", function(){
m.importURL("../seeds/"+name.replace(/[()]/g, '')+".tree", function(){
console.log("tree loaded");
//Trigger SeqLogo from menu, see msa.js:24482 why we need to do this hack!
console.log(defMenu.views["40_vis"]._nodes[3].callback());
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