updated draft_seeds

intbio · Oct 30, 2024 · 9ba73cb · 9ba73cb
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diff --git a/CURATED_SET/curated_service/curatedDB/generate_draft_seeds.ipynb b/CURATED_SET/curated_service/curatedDB/generate_draft_seeds.ipynb
diff --git a/...SET/draft_seeds/CS_H2B_(Echinoidea).fasta → ...D_SET/draft_seeds/CS_H2B_Echinoidea.fasta b/...SET/draft_seeds/CS_H2B_(Echinoidea).fasta → ...D_SET/draft_seeds/CS_H2B_Echinoidea.fasta
diff --git a/...SET/draft_seeds/H1.0_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.0_Homo_sapiens.fasta b/...SET/draft_seeds/H1.0_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.0_Homo_sapiens.fasta
diff --git a/...ET/draft_seeds/H1.10_(Homo_sapiens).fasta → ..._SET/draft_seeds/H1.10_Homo_sapiens.fasta b/...ET/draft_seeds/H1.10_(Homo_sapiens).fasta → ..._SET/draft_seeds/H1.10_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.1_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.1_Homo_sapiens.fasta b/...SET/draft_seeds/H1.1_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.1_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.2_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.2_Homo_sapiens.fasta b/...SET/draft_seeds/H1.2_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.2_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.3_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.3_Homo_sapiens.fasta b/...SET/draft_seeds/H1.3_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.3_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.4_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.4_Homo_sapiens.fasta b/...SET/draft_seeds/H1.4_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.4_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.5_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.5_Homo_sapiens.fasta b/...SET/draft_seeds/H1.5_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.5_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.6_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.6_Homo_sapiens.fasta b/...SET/draft_seeds/H1.6_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.6_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.7_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.7_Homo_sapiens.fasta b/...SET/draft_seeds/H1.7_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.7_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H1.8_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.8_Homo_sapiens.fasta b/...SET/draft_seeds/H1.8_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H1.8_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2A.B.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.B.1_Homo_sapiens.fasta b/.../draft_seeds/H2A.B.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.B.1_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2A.B.1_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.B.1_Mus_musculus.fasta b/.../draft_seeds/H2A.B.1_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.B.1_Mus_musculus.fasta
diff --git a/.../draft_seeds/H2A.B.2_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.B.2_Homo_sapiens.fasta b/.../draft_seeds/H2A.B.2_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.B.2_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2A.B.2_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.B.2_Mus_musculus.fasta b/.../draft_seeds/H2A.B.2_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.B.2_Mus_musculus.fasta
diff --git a/.../draft_seeds/H2A.B.3_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.B.3_Mus_musculus.fasta b/.../draft_seeds/H2A.B.3_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.B.3_Mus_musculus.fasta
diff --git a/...ET/draft_seeds/H2A.B_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.B_Homo_sapiens.fasta b/...ET/draft_seeds/H2A.B_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.B_Homo_sapiens.fasta
diff --git a/...aft_seeds/H2A.B_(Homo_sapiens)_only.fasta → ...draft_seeds/H2A.B_Homo_sapiens_only.fasta b/...aft_seeds/H2A.B_(Homo_sapiens)_only.fasta → ...draft_seeds/H2A.B_Homo_sapiens_only.fasta
diff --git a/...ET/draft_seeds/H2A.B_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.B_Mus_musculus.fasta b/...ET/draft_seeds/H2A.B_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.B_Mus_musculus.fasta
diff --git a/...aft_seeds/H2A.B_(Mus_musculus)_only.fasta → ...draft_seeds/H2A.B_Mus_musculus_only.fasta b/...aft_seeds/H2A.B_(Mus_musculus)_only.fasta → ...draft_seeds/H2A.B_Mus_musculus_only.fasta
diff --git a/...ET/draft_seeds/H2A.J_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.J_Homo_sapiens.fasta b/...ET/draft_seeds/H2A.J_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.J_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2A.L.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.L.1_Homo_sapiens.fasta b/.../draft_seeds/H2A.L.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.L.1_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2A.L.1_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.L.1_Mus_musculus.fasta b/.../draft_seeds/H2A.L.1_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.L.1_Mus_musculus.fasta
diff --git a/.../draft_seeds/H2A.L.2_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.L.2_Mus_musculus.fasta b/.../draft_seeds/H2A.L.2_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.L.2_Mus_musculus.fasta
diff --git a/.../draft_seeds/H2A.L.3_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.L.3_Homo_sapiens.fasta b/.../draft_seeds/H2A.L.3_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.L.3_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2A.L.3_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.L.3_Mus_musculus.fasta b/.../draft_seeds/H2A.L.3_(Mus_musculus).fasta → ...ET/draft_seeds/H2A.L.3_Mus_musculus.fasta
diff --git a/...ET/draft_seeds/H2A.L_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.L_Homo_sapiens.fasta b/...ET/draft_seeds/H2A.L_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.L_Homo_sapiens.fasta
diff --git a/...aft_seeds/H2A.L_(Homo_sapiens)_only.fasta → ...draft_seeds/H2A.L_Homo_sapiens_only.fasta b/...aft_seeds/H2A.L_(Homo_sapiens)_only.fasta → ...draft_seeds/H2A.L_Homo_sapiens_only.fasta
diff --git a/...ET/draft_seeds/H2A.L_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.L_Mus_musculus.fasta b/...ET/draft_seeds/H2A.L_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.L_Mus_musculus.fasta
diff --git a/...aft_seeds/H2A.L_(Mus_musculus)_only.fasta → ...draft_seeds/H2A.L_Mus_musculus_only.fasta b/...aft_seeds/H2A.L_(Mus_musculus)_only.fasta → ...draft_seeds/H2A.L_Mus_musculus_only.fasta
diff --git a/...ET/draft_seeds/H2A.P_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.P_Homo_sapiens.fasta b/...ET/draft_seeds/H2A.P_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.P_Homo_sapiens.fasta
diff --git a/...ET/draft_seeds/H2A.P_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.P_Mus_musculus.fasta b/...ET/draft_seeds/H2A.P_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.P_Mus_musculus.fasta
diff --git a/...TED_SET/draft_seeds/H2A.X_(Animals).fasta → CURATED_SET/draft_seeds/H2A.X_Animals.fasta b/...TED_SET/draft_seeds/H2A.X_(Animals).fasta → CURATED_SET/draft_seeds/H2A.X_Animals.fasta
diff --git a/...ET/draft_seeds/H2A.X_(Animals)_only.fasta → ..._SET/draft_seeds/H2A.X_Animals_only.fasta b/...ET/draft_seeds/H2A.X_(Animals)_only.fasta → ..._SET/draft_seeds/H2A.X_Animals_only.fasta
diff --git a/CURATED_SET/draft_seeds/H2A.X_(Fungi).fasta → CURATED_SET/draft_seeds/H2A.X_Fungi.fasta b/CURATED_SET/draft_seeds/H2A.X_(Fungi).fasta → CURATED_SET/draft_seeds/H2A.X_Fungi.fasta
diff --git a/...ET/draft_seeds/H2A.X_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.X_Homo_sapiens.fasta b/...ET/draft_seeds/H2A.X_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2A.X_Homo_sapiens.fasta
diff --git a/...ED_SET/draft_seeds/H2A.X_(Mammalia).fasta → CURATED_SET/draft_seeds/H2A.X_Mammalia.fasta b/...ED_SET/draft_seeds/H2A.X_(Mammalia).fasta → CURATED_SET/draft_seeds/H2A.X_Mammalia.fasta
diff --git a/...T/draft_seeds/H2A.X_(Mammalia)_only.fasta → ...SET/draft_seeds/H2A.X_Mammalia_only.fasta b/...T/draft_seeds/H2A.X_(Mammalia)_only.fasta → ...SET/draft_seeds/H2A.X_Mammalia_only.fasta
diff --git a/...ET/draft_seeds/H2A.X_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.X_Mus_musculus.fasta b/...ET/draft_seeds/H2A.X_(Mus_musculus).fasta → ..._SET/draft_seeds/H2A.X_Mus_musculus.fasta
diff --git a/CURATED_SET/draft_seeds/H2A.X_(Plants).fasta → CURATED_SET/draft_seeds/H2A.X_Plants.fasta b/CURATED_SET/draft_seeds/H2A.X_(Plants).fasta → CURATED_SET/draft_seeds/H2A.X_Plants.fasta
diff --git a/...ED_SET/draft_seeds/H2A.X_(Protists).fasta → CURATED_SET/draft_seeds/H2A.X_Protists.fasta b/...ED_SET/draft_seeds/H2A.X_(Protists).fasta → CURATED_SET/draft_seeds/H2A.X_Protists.fasta
diff --git a/..._SET/draft_seeds/H2A.X_(Vertebrata).fasta → ...ED_SET/draft_seeds/H2A.X_Vertebrata.fasta b/..._SET/draft_seeds/H2A.X_(Vertebrata).fasta → ...ED_SET/draft_seeds/H2A.X_Vertebrata.fasta
diff --git a/...draft_seeds/H2A.X_(Vertebrata)_only.fasta → ...T/draft_seeds/H2A.X_Vertebrata_only.fasta b/...draft_seeds/H2A.X_(Vertebrata)_only.fasta → ...T/draft_seeds/H2A.X_Vertebrata_only.fasta
diff --git a/..._SET/draft_seeds/H2A.Z.1_(Chordata).fasta → ...ED_SET/draft_seeds/H2A.Z.1_Chordata.fasta b/..._SET/draft_seeds/H2A.Z.1_(Chordata).fasta → ...ED_SET/draft_seeds/H2A.Z.1_Chordata.fasta
diff --git a/...draft_seeds/H2A.Z.1_(Chordata)_only.fasta → ...T/draft_seeds/H2A.Z.1_Chordata_only.fasta b/...draft_seeds/H2A.Z.1_(Chordata)_only.fasta → ...T/draft_seeds/H2A.Z.1_Chordata_only.fasta
diff --git a/.../draft_seeds/H2A.Z.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.Z.1_Homo_sapiens.fasta b/.../draft_seeds/H2A.Z.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2A.Z.1_Homo_sapiens.fasta
diff --git a/..._SET/draft_seeds/H2A.Z.1_(Primates).fasta → ...ED_SET/draft_seeds/H2A.Z.1_Primates.fasta b/..._SET/draft_seeds/H2A.Z.1_(Primates).fasta → ...ED_SET/draft_seeds/H2A.Z.1_Primates.fasta
diff --git a/...draft_seeds/H2A.Z.1_(Primates)_only.fasta → ...T/draft_seeds/H2A.Z.1_Primates_only.fasta b/...draft_seeds/H2A.Z.1_(Primates)_only.fasta → ...T/draft_seeds/H2A.Z.1_Primates_only.fasta
diff --git a/...aft_seeds/H2A.Z.2.s1_(Homo_sapiens).fasta → ...draft_seeds/H2A.Z.2.s1_Homo_sapiens.fasta b/...aft_seeds/H2A.Z.2.s1_(Homo_sapiens).fasta → ...draft_seeds/H2A.Z.2.s1_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/H2A.Z.2.s1_(Primates).fasta → ...SET/draft_seeds/H2A.Z.2.s1_Primates.fasta b/...T/draft_seeds/H2A.Z.2.s1_(Primates).fasta → ...SET/draft_seeds/H2A.Z.2.s1_Primates.fasta
diff --git a/...ft_seeds/H2A.Z.2.s1_(Primates)_only.fasta → ...raft_seeds/H2A.Z.2.s1_Primates_only.fasta b/...ft_seeds/H2A.Z.2.s1_(Primates)_only.fasta → ...raft_seeds/H2A.Z.2.s1_Primates_only.fasta
diff --git a/...aft_seeds/H2A.Z.2.s2_(Homo_sapiens).fasta → ...draft_seeds/H2A.Z.2.s2_Homo_sapiens.fasta b/...aft_seeds/H2A.Z.2.s2_(Homo_sapiens).fasta → ...draft_seeds/H2A.Z.2.s2_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/H2A.Z.2.s2_(Primates).fasta → ...SET/draft_seeds/H2A.Z.2.s2_Primates.fasta b/...T/draft_seeds/H2A.Z.2.s2_(Primates).fasta → ...SET/draft_seeds/H2A.Z.2.s2_Primates.fasta
diff --git a/...ft_seeds/H2A.Z.2.s2_(Primates)_only.fasta → ...raft_seeds/H2A.Z.2.s2_Primates_only.fasta b/...ft_seeds/H2A.Z.2.s2_(Primates)_only.fasta → ...raft_seeds/H2A.Z.2.s2_Primates_only.fasta
diff --git a/..._SET/draft_seeds/H2A.Z.2_(Chordata).fasta → ...ED_SET/draft_seeds/H2A.Z.2_Chordata.fasta b/..._SET/draft_seeds/H2A.Z.2_(Chordata).fasta → ...ED_SET/draft_seeds/H2A.Z.2_Chordata.fasta
diff --git a/...draft_seeds/H2A.Z.2_(Chordata)_only.fasta → ...T/draft_seeds/H2A.Z.2_Chordata_only.fasta b/...draft_seeds/H2A.Z.2_(Chordata)_only.fasta → ...T/draft_seeds/H2A.Z.2_Chordata_only.fasta
diff --git a/..._SET/draft_seeds/H2A.Z.2_(Primates).fasta → ...ED_SET/draft_seeds/H2A.Z.2_Primates.fasta b/..._SET/draft_seeds/H2A.Z.2_(Primates).fasta → ...ED_SET/draft_seeds/H2A.Z.2_Primates.fasta
diff --git a/...draft_seeds/H2A.Z.2_(Primates)_only.fasta → ...T/draft_seeds/H2A.Z.2_Primates_only.fasta b/...draft_seeds/H2A.Z.2_(Primates)_only.fasta → ...T/draft_seeds/H2A.Z.2_Primates_only.fasta
diff --git a/...ET/draft_seeds/H2B.K_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2B.K_Homo_sapiens.fasta b/...ET/draft_seeds/H2B.K_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2B.K_Homo_sapiens.fasta
diff --git a/...ET/draft_seeds/H2B.N_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2B.N_Homo_sapiens.fasta b/...ET/draft_seeds/H2B.N_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2B.N_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2B.W.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2B.W.1_Homo_sapiens.fasta b/.../draft_seeds/H2B.W.1_(Homo_sapiens).fasta → ...ET/draft_seeds/H2B.W.1_Homo_sapiens.fasta
diff --git a/.../draft_seeds/H2B.W.2_(Homo_sapiens).fasta → ...ET/draft_seeds/H2B.W.2_Homo_sapiens.fasta b/.../draft_seeds/H2B.W.2_(Homo_sapiens).fasta → ...ET/draft_seeds/H2B.W.2_Homo_sapiens.fasta
diff --git a/...ET/draft_seeds/H2B.W_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2B.W_Homo_sapiens.fasta b/...ET/draft_seeds/H2B.W_(Homo_sapiens).fasta → ..._SET/draft_seeds/H2B.W_Homo_sapiens.fasta
diff --git a/...aft_seeds/H2B.W_(Homo_sapiens)_only.fasta → ...draft_seeds/H2B.W_Homo_sapiens_only.fasta b/...aft_seeds/H2B.W_(Homo_sapiens)_only.fasta → ...draft_seeds/H2B.W_Homo_sapiens_only.fasta
diff --git a/..._SET/draft_seeds/H3.1-like_(Plants).fasta → ...ED_SET/draft_seeds/H3.1-like_Plants.fasta b/..._SET/draft_seeds/H3.1-like_(Plants).fasta → ...ED_SET/draft_seeds/H3.1-like_Plants.fasta
diff --git a/...SET/draft_seeds/H3.3-like_(Animals).fasta → ...D_SET/draft_seeds/H3.3-like_Animals.fasta b/...SET/draft_seeds/H3.3-like_(Animals).fasta → ...D_SET/draft_seeds/H3.3-like_Animals.fasta
diff --git a/...raft_seeds/H3.3-like_(Animals)_only.fasta → .../draft_seeds/H3.3-like_Animals_only.fasta b/...raft_seeds/H3.3-like_(Animals)_only.fasta → .../draft_seeds/H3.3-like_Animals_only.fasta
diff --git a/..._SET/draft_seeds/H3.3-like_(Plants).fasta → ...ED_SET/draft_seeds/H3.3-like_Plants.fasta b/..._SET/draft_seeds/H3.3-like_(Plants).fasta → ...ED_SET/draft_seeds/H3.3-like_Plants.fasta
diff --git a/...draft_seeds/H3.3-like_(Plants)_only.fasta → ...T/draft_seeds/H3.3-like_Plants_only.fasta b/...draft_seeds/H3.3-like_(Plants)_only.fasta → ...T/draft_seeds/H3.3-like_Plants_only.fasta
diff --git a/CURATED_SET/draft_seeds/H3.3_(Animals).fasta → CURATED_SET/draft_seeds/H3.3_Animals.fasta b/CURATED_SET/draft_seeds/H3.3_(Animals).fasta → CURATED_SET/draft_seeds/H3.3_Animals.fasta
diff --git a/...SET/draft_seeds/H3.3_(Animals)_only.fasta → ...D_SET/draft_seeds/H3.3_Animals_only.fasta b/...SET/draft_seeds/H3.3_(Animals)_only.fasta → ...D_SET/draft_seeds/H3.3_Animals_only.fasta
diff --git a/...D_SET/draft_seeds/H3.3_(Ascomycota).fasta → ...TED_SET/draft_seeds/H3.3_Ascomycota.fasta b/...D_SET/draft_seeds/H3.3_(Ascomycota).fasta → ...TED_SET/draft_seeds/H3.3_Ascomycota.fasta
diff --git a/CURATED_SET/draft_seeds/H3.3_(Fungi).fasta → CURATED_SET/draft_seeds/H3.3_Fungi.fasta b/CURATED_SET/draft_seeds/H3.3_(Fungi).fasta → CURATED_SET/draft_seeds/H3.3_Fungi.fasta
diff --git a/...D_SET/draft_seeds/H3.3_(Fungi)_only.fasta → ...TED_SET/draft_seeds/H3.3_Fungi_only.fasta b/...D_SET/draft_seeds/H3.3_(Fungi)_only.fasta → ...TED_SET/draft_seeds/H3.3_Fungi_only.fasta
diff --git a/...SET/draft_seeds/H3.3_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.3_Homo_sapiens.fasta b/...SET/draft_seeds/H3.3_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.3_Homo_sapiens.fasta
diff --git a/CURATED_SET/draft_seeds/H3.3_(Plants).fasta → CURATED_SET/draft_seeds/H3.3_Plants.fasta b/CURATED_SET/draft_seeds/H3.3_(Plants).fasta → CURATED_SET/draft_seeds/H3.3_Plants.fasta
diff --git a/...TED_SET/draft_seeds/H3.3_(Protists).fasta → CURATED_SET/draft_seeds/H3.3_Protists.fasta b/...TED_SET/draft_seeds/H3.3_(Protists).fasta → CURATED_SET/draft_seeds/H3.3_Protists.fasta
diff --git a/...SET/draft_seeds/H3.4_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.4_Homo_sapiens.fasta b/...SET/draft_seeds/H3.4_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.4_Homo_sapiens.fasta
diff --git a/...TED_SET/draft_seeds/H3.4_(Mammalia).fasta → CURATED_SET/draft_seeds/H3.4_Mammalia.fasta b/...TED_SET/draft_seeds/H3.4_(Mammalia).fasta → CURATED_SET/draft_seeds/H3.4_Mammalia.fasta
diff --git a/...ET/draft_seeds/H3.4_(Mammalia)_only.fasta → ..._SET/draft_seeds/H3.4_Mammalia_only.fasta b/...ET/draft_seeds/H3.4_(Mammalia)_only.fasta → ..._SET/draft_seeds/H3.4_Mammalia_only.fasta
diff --git a/...ED_SET/draft_seeds/H3.5_(Hominidae).fasta → CURATED_SET/draft_seeds/H3.5_Hominidae.fasta b/...ED_SET/draft_seeds/H3.5_(Hominidae).fasta → CURATED_SET/draft_seeds/H3.5_Hominidae.fasta
diff --git a/...T/draft_seeds/H3.5_(Hominidae)_only.fasta → ...SET/draft_seeds/H3.5_Hominidae_only.fasta b/...T/draft_seeds/H3.5_(Hominidae)_only.fasta → ...SET/draft_seeds/H3.5_Hominidae_only.fasta
diff --git a/...SET/draft_seeds/H3.5_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.5_Homo_sapiens.fasta b/...SET/draft_seeds/H3.5_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.5_Homo_sapiens.fasta
diff --git a/...ED_SET/draft_seeds/H3.6_(Mammals?)?.fasta → CURATED_SET/draft_seeds/H3.6_Mammals??.fasta b/...ED_SET/draft_seeds/H3.6_(Mammals?)?.fasta → CURATED_SET/draft_seeds/H3.6_Mammals??.fasta
diff --git a/...ED_SET/draft_seeds/H3.7_(Mammals?)?.fasta → CURATED_SET/draft_seeds/H3.7_Mammals??.fasta b/...ED_SET/draft_seeds/H3.7_(Mammals?)?.fasta → CURATED_SET/draft_seeds/H3.7_Mammals??.fasta
diff --git a/...ED_SET/draft_seeds/H3.8_(Mammals?)?.fasta → CURATED_SET/draft_seeds/H3.8_Mammals??.fasta b/...ED_SET/draft_seeds/H3.8_(Mammals?)?.fasta → CURATED_SET/draft_seeds/H3.8_Mammals??.fasta
diff --git a/...TED_SET/draft_seeds/H3.B_(Giardia?).fasta → CURATED_SET/draft_seeds/H3.B_Giardia?.fasta b/...TED_SET/draft_seeds/H3.B_(Giardia?).fasta → CURATED_SET/draft_seeds/H3.B_Giardia?.fasta
diff --git a/...SET/draft_seeds/H3.P_(Moneuplotes?).fasta → ...D_SET/draft_seeds/H3.P_Moneuplotes?.fasta b/...SET/draft_seeds/H3.P_(Moneuplotes?).fasta → ...D_SET/draft_seeds/H3.P_Moneuplotes?.fasta
diff --git a/...draft_seeds/H3.V_(Trypanosomatidae).fasta → ...T/draft_seeds/H3.V_Trypanosomatidae.fasta b/...draft_seeds/H3.V_(Trypanosomatidae).fasta → ...T/draft_seeds/H3.V_Trypanosomatidae.fasta
diff --git a/...SET/draft_seeds/H3.X_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.X_Homo_sapiens.fasta b/...SET/draft_seeds/H3.X_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.X_Homo_sapiens.fasta
diff --git a/...ED_SET/draft_seeds/H3.X_(Primates?).fasta → CURATED_SET/draft_seeds/H3.X_Primates?.fasta b/...ED_SET/draft_seeds/H3.X_(Primates?).fasta → CURATED_SET/draft_seeds/H3.X_Primates?.fasta
diff --git a/...T/draft_seeds/H3.X_(Primates?)_only.fasta → ...SET/draft_seeds/H3.X_Primates?_only.fasta b/...T/draft_seeds/H3.X_(Primates?)_only.fasta → ...SET/draft_seeds/H3.X_Primates?_only.fasta
diff --git a/...T/draft_seeds/H3.Y.1_(Homo_sapiens).fasta → ...SET/draft_seeds/H3.Y.1_Homo_sapiens.fasta b/...T/draft_seeds/H3.Y.1_(Homo_sapiens).fasta → ...SET/draft_seeds/H3.Y.1_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/H3.Y.2_(Homo_sapiens).fasta → ...SET/draft_seeds/H3.Y.2_Homo_sapiens.fasta b/...T/draft_seeds/H3.Y.2_(Homo_sapiens).fasta → ...SET/draft_seeds/H3.Y.2_Homo_sapiens.fasta
diff --git a/...SET/draft_seeds/H3.Y_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.Y_Homo_sapiens.fasta b/...SET/draft_seeds/H3.Y_(Homo_sapiens).fasta → ...D_SET/draft_seeds/H3.Y_Homo_sapiens.fasta
diff --git a/...raft_seeds/H3.Y_(Homo_sapiens)_only.fasta → .../draft_seeds/H3.Y_Homo_sapiens_only.fasta b/...raft_seeds/H3.Y_(Homo_sapiens)_only.fasta → .../draft_seeds/H3.Y_Homo_sapiens_only.fasta
diff --git a/...ED_SET/draft_seeds/H3.Y_(Primates?).fasta → CURATED_SET/draft_seeds/H3.Y_Primates?.fasta b/...ED_SET/draft_seeds/H3.Y_(Primates?).fasta → CURATED_SET/draft_seeds/H3.Y_Primates?.fasta
diff --git a/...T/draft_seeds/H3.Y_(Primates?)_only.fasta → ...SET/draft_seeds/H3.Y_Primates?_only.fasta b/...T/draft_seeds/H3.Y_(Primates?)_only.fasta → ...SET/draft_seeds/H3.Y_Primates?_only.fasta
diff --git a/CURATED_SET/draft_seeds/H3_(Lilly???).fasta → CURATED_SET/draft_seeds/H3_Lilly???.fasta b/CURATED_SET/draft_seeds/H3_(Lilly???).fasta → CURATED_SET/draft_seeds/H3_Lilly???.fasta
diff --git a/.../draft_seeds/cH2A.10_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2A.10_Homo_sapiens.fasta b/.../draft_seeds/cH2A.10_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2A.10_Homo_sapiens.fasta
diff --git a/.../draft_seeds/cH2A.11_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2A.11_Homo_sapiens.fasta b/.../draft_seeds/cH2A.11_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2A.11_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.1_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.1_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.1_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.1_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.1_(Mus_musculus).fasta → ...SET/draft_seeds/cH2A.1_Mus_musculus.fasta b/...T/draft_seeds/cH2A.1_(Mus_musculus).fasta → ...SET/draft_seeds/cH2A.1_Mus_musculus.fasta
diff --git a/...T/draft_seeds/cH2A.2_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.2_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.2_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.2_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.3_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.3_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.3_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.3_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.4_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.4_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.4_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.4_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.5_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.5_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.5_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.5_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.6_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.6_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.6_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.6_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.7_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.7_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.7_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.7_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.8_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.8_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.8_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.8_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2A.9_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.9_Homo_sapiens.fasta b/...T/draft_seeds/cH2A.9_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2A.9_Homo_sapiens.fasta
diff --git a/CURATED_SET/draft_seeds/cH2A_(Animals).fasta → CURATED_SET/draft_seeds/cH2A_Animals.fasta b/CURATED_SET/draft_seeds/cH2A_(Animals).fasta → CURATED_SET/draft_seeds/cH2A_Animals.fasta
diff --git a/...SET/draft_seeds/cH2A_(Animals)_only.fasta → ...D_SET/draft_seeds/cH2A_Animals_only.fasta b/...SET/draft_seeds/cH2A_(Animals)_only.fasta → ...D_SET/draft_seeds/cH2A_Animals_only.fasta
diff --git a/..._SET/draft_seeds/cH2A_(Chlorophyta).fasta → ...ED_SET/draft_seeds/cH2A_Chlorophyta.fasta b/..._SET/draft_seeds/cH2A_(Chlorophyta).fasta → ...ED_SET/draft_seeds/cH2A_Chlorophyta.fasta
diff --git a/..._SET/draft_seeds/cH2A_(Embryophyta).fasta → ...ED_SET/draft_seeds/cH2A_Embryophyta.fasta b/..._SET/draft_seeds/cH2A_(Embryophyta).fasta → ...ED_SET/draft_seeds/cH2A_Embryophyta.fasta
diff --git a/CURATED_SET/draft_seeds/cH2A_(Fungi).fasta → CURATED_SET/draft_seeds/cH2A_Fungi.fasta b/CURATED_SET/draft_seeds/cH2A_(Fungi).fasta → CURATED_SET/draft_seeds/cH2A_Fungi.fasta
diff --git a/...SET/draft_seeds/cH2A_(Homo_sapiens).fasta → ...D_SET/draft_seeds/cH2A_Homo_sapiens.fasta b/...SET/draft_seeds/cH2A_(Homo_sapiens).fasta → ...D_SET/draft_seeds/cH2A_Homo_sapiens.fasta
diff --git a/...raft_seeds/cH2A_(Homo_sapiens)_only.fasta → .../draft_seeds/cH2A_Homo_sapiens_only.fasta b/...raft_seeds/cH2A_(Homo_sapiens)_only.fasta → .../draft_seeds/cH2A_Homo_sapiens_only.fasta
diff --git a/...TED_SET/draft_seeds/cH2A_(Mammalia).fasta → CURATED_SET/draft_seeds/cH2A_Mammalia.fasta b/...TED_SET/draft_seeds/cH2A_(Mammalia).fasta → CURATED_SET/draft_seeds/cH2A_Mammalia.fasta
diff --git a/...ET/draft_seeds/cH2A_(Mammalia)_only.fasta → ..._SET/draft_seeds/cH2A_Mammalia_only.fasta b/...ET/draft_seeds/cH2A_(Mammalia)_only.fasta → ..._SET/draft_seeds/cH2A_Mammalia_only.fasta
diff --git a/...SET/draft_seeds/cH2A_(Mus_musculus).fasta → ...D_SET/draft_seeds/cH2A_Mus_musculus.fasta b/...SET/draft_seeds/cH2A_(Mus_musculus).fasta → ...D_SET/draft_seeds/cH2A_Mus_musculus.fasta
diff --git a/...raft_seeds/cH2A_(Mus_musculus)_only.fasta → .../draft_seeds/cH2A_Mus_musculus_only.fasta b/...raft_seeds/cH2A_(Mus_musculus)_only.fasta → .../draft_seeds/cH2A_Mus_musculus_only.fasta
diff --git a/CURATED_SET/draft_seeds/cH2A_(Plants).fasta → CURATED_SET/draft_seeds/cH2A_Plants.fasta b/CURATED_SET/draft_seeds/cH2A_(Plants).fasta → CURATED_SET/draft_seeds/cH2A_Plants.fasta
diff --git a/..._SET/draft_seeds/cH2A_(Plants)_only.fasta → ...ED_SET/draft_seeds/cH2A_Plants_only.fasta b/..._SET/draft_seeds/cH2A_(Plants)_only.fasta → ...ED_SET/draft_seeds/cH2A_Plants_only.fasta
diff --git a/...TED_SET/draft_seeds/cH2A_(Protists).fasta → CURATED_SET/draft_seeds/cH2A_Protists.fasta b/...TED_SET/draft_seeds/cH2A_(Protists).fasta → CURATED_SET/draft_seeds/cH2A_Protists.fasta
diff --git a/...D_SET/draft_seeds/cH2A_(Vertebrata).fasta → ...TED_SET/draft_seeds/cH2A_Vertebrata.fasta b/...D_SET/draft_seeds/cH2A_(Vertebrata).fasta → ...TED_SET/draft_seeds/cH2A_Vertebrata.fasta
diff --git a/.../draft_seeds/cH2A_(Vertebrata)_only.fasta → ...ET/draft_seeds/cH2A_Vertebrata_only.fasta b/.../draft_seeds/cH2A_(Vertebrata)_only.fasta → ...ET/draft_seeds/cH2A_Vertebrata_only.fasta
diff --git a/.../draft_seeds/cH2B.10_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.10_Homo_sapiens.fasta b/.../draft_seeds/cH2B.10_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.10_Homo_sapiens.fasta
diff --git a/.../draft_seeds/cH2B.11_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.11_Homo_sapiens.fasta b/.../draft_seeds/cH2B.11_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.11_Homo_sapiens.fasta
diff --git a/.../draft_seeds/cH2B.12_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.12_Homo_sapiens.fasta b/.../draft_seeds/cH2B.12_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.12_Homo_sapiens.fasta
diff --git a/.../draft_seeds/cH2B.13_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.13_Homo_sapiens.fasta b/.../draft_seeds/cH2B.13_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.13_Homo_sapiens.fasta
diff --git a/.../draft_seeds/cH2B.14_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.14_Homo_sapiens.fasta b/.../draft_seeds/cH2B.14_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.14_Homo_sapiens.fasta
diff --git a/.../draft_seeds/cH2B.15_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.15_Homo_sapiens.fasta b/.../draft_seeds/cH2B.15_(Homo_sapiens).fasta → ...ET/draft_seeds/cH2B.15_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.1_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.1_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.1_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.1_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.1_(Mus_musculus).fasta → ...SET/draft_seeds/cH2B.1_Mus_musculus.fasta b/...T/draft_seeds/cH2B.1_(Mus_musculus).fasta → ...SET/draft_seeds/cH2B.1_Mus_musculus.fasta
diff --git a/...T/draft_seeds/cH2B.2_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.2_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.2_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.2_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.3_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.3_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.3_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.3_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.4_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.4_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.4_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.4_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.5_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.5_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.5_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.5_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.6_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.6_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.6_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.6_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.7_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.7_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.7_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.7_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.8_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.8_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.8_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.8_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.9_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.9_Homo_sapiens.fasta b/...T/draft_seeds/cH2B.9_(Homo_sapiens).fasta → ...SET/draft_seeds/cH2B.9_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/cH2B.E_(Mus_musculus).fasta → ...SET/draft_seeds/cH2B.E_Mus_musculus.fasta b/...T/draft_seeds/cH2B.E_(Mus_musculus).fasta → ...SET/draft_seeds/cH2B.E_Mus_musculus.fasta
diff --git a/CURATED_SET/draft_seeds/cH2B_(Animals).fasta → CURATED_SET/draft_seeds/cH2B_Animals.fasta b/CURATED_SET/draft_seeds/cH2B_(Animals).fasta → CURATED_SET/draft_seeds/cH2B_Animals.fasta
diff --git a/...SET/draft_seeds/cH2B_(Animals)_only.fasta → ...D_SET/draft_seeds/cH2B_Animals_only.fasta b/...SET/draft_seeds/cH2B_(Animals)_only.fasta → ...D_SET/draft_seeds/cH2B_Animals_only.fasta
diff --git a/..._SET/draft_seeds/cH2B_(Chlorophyta).fasta → ...ED_SET/draft_seeds/cH2B_Chlorophyta.fasta b/..._SET/draft_seeds/cH2B_(Chlorophyta).fasta → ...ED_SET/draft_seeds/cH2B_Chlorophyta.fasta
diff --git a/..._SET/draft_seeds/cH2B_(Embryophyta).fasta → ...ED_SET/draft_seeds/cH2B_Embryophyta.fasta b/..._SET/draft_seeds/cH2B_(Embryophyta).fasta → ...ED_SET/draft_seeds/cH2B_Embryophyta.fasta
diff --git a/CURATED_SET/draft_seeds/cH2B_(Fungi).fasta → CURATED_SET/draft_seeds/cH2B_Fungi.fasta b/CURATED_SET/draft_seeds/cH2B_(Fungi).fasta → CURATED_SET/draft_seeds/cH2B_Fungi.fasta
diff --git a/...SET/draft_seeds/cH2B_(Homo_sapiens).fasta → ...D_SET/draft_seeds/cH2B_Homo_sapiens.fasta b/...SET/draft_seeds/cH2B_(Homo_sapiens).fasta → ...D_SET/draft_seeds/cH2B_Homo_sapiens.fasta
diff --git a/...raft_seeds/cH2B_(Homo_sapiens)_only.fasta → .../draft_seeds/cH2B_Homo_sapiens_only.fasta b/...raft_seeds/cH2B_(Homo_sapiens)_only.fasta → .../draft_seeds/cH2B_Homo_sapiens_only.fasta
diff --git a/...TED_SET/draft_seeds/cH2B_(Mammalia).fasta → CURATED_SET/draft_seeds/cH2B_Mammalia.fasta b/...TED_SET/draft_seeds/cH2B_(Mammalia).fasta → CURATED_SET/draft_seeds/cH2B_Mammalia.fasta
diff --git a/...ET/draft_seeds/cH2B_(Mammalia)_only.fasta → ..._SET/draft_seeds/cH2B_Mammalia_only.fasta b/...ET/draft_seeds/cH2B_(Mammalia)_only.fasta → ..._SET/draft_seeds/cH2B_Mammalia_only.fasta
diff --git a/...SET/draft_seeds/cH2B_(Mus_musculus).fasta → ...D_SET/draft_seeds/cH2B_Mus_musculus.fasta b/...SET/draft_seeds/cH2B_(Mus_musculus).fasta → ...D_SET/draft_seeds/cH2B_Mus_musculus.fasta
diff --git a/...raft_seeds/cH2B_(Mus_musculus)_only.fasta → .../draft_seeds/cH2B_Mus_musculus_only.fasta b/...raft_seeds/cH2B_(Mus_musculus)_only.fasta → .../draft_seeds/cH2B_Mus_musculus_only.fasta
diff --git a/CURATED_SET/draft_seeds/cH2B_(Plants).fasta → CURATED_SET/draft_seeds/cH2B_Plants.fasta b/CURATED_SET/draft_seeds/cH2B_(Plants).fasta → CURATED_SET/draft_seeds/cH2B_Plants.fasta
diff --git a/..._SET/draft_seeds/cH2B_(Plants)_only.fasta → ...ED_SET/draft_seeds/cH2B_Plants_only.fasta b/..._SET/draft_seeds/cH2B_(Plants)_only.fasta → ...ED_SET/draft_seeds/cH2B_Plants_only.fasta
diff --git a/...TED_SET/draft_seeds/cH2B_(Protists).fasta → CURATED_SET/draft_seeds/cH2B_Protists.fasta b/...TED_SET/draft_seeds/cH2B_(Protists).fasta → CURATED_SET/draft_seeds/cH2B_Protists.fasta
diff --git a/...D_SET/draft_seeds/cH2B_(Vertebrata).fasta → ...TED_SET/draft_seeds/cH2B_Vertebrata.fasta b/...D_SET/draft_seeds/cH2B_(Vertebrata).fasta → ...TED_SET/draft_seeds/cH2B_Vertebrata.fasta
diff --git a/.../draft_seeds/cH2B_(Vertebrata)_only.fasta → ...ET/draft_seeds/cH2B_Vertebrata_only.fasta b/.../draft_seeds/cH2B_(Vertebrata)_only.fasta → ...ET/draft_seeds/cH2B_Vertebrata_only.fasta
diff --git a/...ET/draft_seeds/cH3.1_(Homo_sapiens).fasta → ..._SET/draft_seeds/cH3.1_Homo_sapiens.fasta b/...ET/draft_seeds/cH3.1_(Homo_sapiens).fasta → ..._SET/draft_seeds/cH3.1_Homo_sapiens.fasta
diff --git a/...ED_SET/draft_seeds/cH3.1_(Mammalia).fasta → CURATED_SET/draft_seeds/cH3.1_Mammalia.fasta b/...ED_SET/draft_seeds/cH3.1_(Mammalia).fasta → CURATED_SET/draft_seeds/cH3.1_Mammalia.fasta
diff --git a/...T/draft_seeds/cH3.1_(Mammalia)_only.fasta → ...SET/draft_seeds/cH3.1_Mammalia_only.fasta b/...T/draft_seeds/cH3.1_(Mammalia)_only.fasta → ...SET/draft_seeds/cH3.1_Mammalia_only.fasta
diff --git a/...ET/draft_seeds/cH3.2_(Homo_sapiens).fasta → ..._SET/draft_seeds/cH3.2_Homo_sapiens.fasta b/...ET/draft_seeds/cH3.2_(Homo_sapiens).fasta → ..._SET/draft_seeds/cH3.2_Homo_sapiens.fasta
diff --git a/...ED_SET/draft_seeds/cH3.2_(Mammalia).fasta → CURATED_SET/draft_seeds/cH3.2_Mammalia.fasta b/...ED_SET/draft_seeds/cH3.2_(Mammalia).fasta → CURATED_SET/draft_seeds/cH3.2_Mammalia.fasta
diff --git a/...T/draft_seeds/cH3.2_(Mammalia)_only.fasta → ...SET/draft_seeds/cH3.2_Mammalia_only.fasta b/...T/draft_seeds/cH3.2_(Mammalia)_only.fasta → ...SET/draft_seeds/cH3.2_Mammalia_only.fasta
diff --git a/CURATED_SET/draft_seeds/cH3_(Animals).fasta → CURATED_SET/draft_seeds/cH3_Animals.fasta b/CURATED_SET/draft_seeds/cH3_(Animals).fasta → CURATED_SET/draft_seeds/cH3_Animals.fasta
diff --git a/..._SET/draft_seeds/cH3_(Animals)_only.fasta → ...ED_SET/draft_seeds/cH3_Animals_only.fasta b/..._SET/draft_seeds/cH3_(Animals)_only.fasta → ...ED_SET/draft_seeds/cH3_Animals_only.fasta
diff --git a/...D_SET/draft_seeds/cH3_(Chlorophyta).fasta → ...TED_SET/draft_seeds/cH3_Chlorophyta.fasta b/...D_SET/draft_seeds/cH3_(Chlorophyta).fasta → ...TED_SET/draft_seeds/cH3_Chlorophyta.fasta
diff --git a/...D_SET/draft_seeds/cH3_(Embryophyta).fasta → ...TED_SET/draft_seeds/cH3_Embryophyta.fasta b/...D_SET/draft_seeds/cH3_(Embryophyta).fasta → ...TED_SET/draft_seeds/cH3_Embryophyta.fasta
diff --git a/CURATED_SET/draft_seeds/cH3_(Fungi).fasta → CURATED_SET/draft_seeds/cH3_Fungi.fasta b/CURATED_SET/draft_seeds/cH3_(Fungi).fasta → CURATED_SET/draft_seeds/cH3_Fungi.fasta
diff --git a/CURATED_SET/draft_seeds/cH3_(Mammalia).fasta → CURATED_SET/draft_seeds/cH3_Mammalia.fasta b/CURATED_SET/draft_seeds/cH3_(Mammalia).fasta → CURATED_SET/draft_seeds/cH3_Mammalia.fasta
diff --git a/...SET/draft_seeds/cH3_(Mammalia)_only.fasta → ...D_SET/draft_seeds/cH3_Mammalia_only.fasta b/...SET/draft_seeds/cH3_(Mammalia)_only.fasta → ...D_SET/draft_seeds/cH3_Mammalia_only.fasta
diff --git a/CURATED_SET/draft_seeds/cH3_(Plants).fasta → CURATED_SET/draft_seeds/cH3_Plants.fasta b/CURATED_SET/draft_seeds/cH3_(Plants).fasta → CURATED_SET/draft_seeds/cH3_Plants.fasta
diff --git a/...D_SET/draft_seeds/cH3_(Plants)_only.fasta → ...TED_SET/draft_seeds/cH3_Plants_only.fasta b/...D_SET/draft_seeds/cH3_(Plants)_only.fasta → ...TED_SET/draft_seeds/cH3_Plants_only.fasta
diff --git a/CURATED_SET/draft_seeds/cH3_(Protists).fasta → CURATED_SET/draft_seeds/cH3_Protists.fasta b/CURATED_SET/draft_seeds/cH3_(Protists).fasta → CURATED_SET/draft_seeds/cH3_Protists.fasta
diff --git a/...ED_SET/draft_seeds/cH3_(Vertebrata).fasta → CURATED_SET/draft_seeds/cH3_Vertebrata.fasta b/...ED_SET/draft_seeds/cH3_(Vertebrata).fasta → CURATED_SET/draft_seeds/cH3_Vertebrata.fasta
diff --git a/...T/draft_seeds/cH3_(Vertebrata)_only.fasta → ...SET/draft_seeds/cH3_Vertebrata_only.fasta b/...T/draft_seeds/cH3_(Vertebrata)_only.fasta → ...SET/draft_seeds/cH3_Vertebrata_only.fasta
diff --git a/..._SET/draft_seeds/cH4_(Homo_sapiens).fasta → ...ED_SET/draft_seeds/cH4_Homo_sapiens.fasta b/..._SET/draft_seeds/cH4_(Homo_sapiens).fasta → ...ED_SET/draft_seeds/cH4_Homo_sapiens.fasta
diff --git a/...TED_SET/draft_seeds/cenH3_(Animals).fasta → CURATED_SET/draft_seeds/cenH3_Animals.fasta b/...TED_SET/draft_seeds/cenH3_(Animals).fasta → CURATED_SET/draft_seeds/cenH3_Animals.fasta
diff --git a/...ET/draft_seeds/cenH3_(Animals)_only.fasta → ..._SET/draft_seeds/cenH3_Animals_only.fasta b/...ET/draft_seeds/cenH3_(Animals)_only.fasta → ..._SET/draft_seeds/cenH3_Animals_only.fasta
diff --git a/...TED_SET/draft_seeds/cenH3_(Eukarya).fasta → CURATED_SET/draft_seeds/cenH3_Eukarya.fasta b/...TED_SET/draft_seeds/cenH3_(Eukarya).fasta → CURATED_SET/draft_seeds/cenH3_Eukarya.fasta
diff --git a/...ET/draft_seeds/cenH3_(Eukarya)_only.fasta → ..._SET/draft_seeds/cenH3_Eukarya_only.fasta b/...ET/draft_seeds/cenH3_(Eukarya)_only.fasta → ..._SET/draft_seeds/cenH3_Eukarya_only.fasta
diff --git a/CURATED_SET/draft_seeds/cenH3_(Fungi).fasta → CURATED_SET/draft_seeds/cenH3_Fungi.fasta b/CURATED_SET/draft_seeds/cenH3_(Fungi).fasta → CURATED_SET/draft_seeds/cenH3_Fungi.fasta
diff --git a/...ET/draft_seeds/cenH3_(Homo_sapiens).fasta → ..._SET/draft_seeds/cenH3_Homo_sapiens.fasta b/...ET/draft_seeds/cenH3_(Homo_sapiens).fasta → ..._SET/draft_seeds/cenH3_Homo_sapiens.fasta
diff --git a/...ED_SET/draft_seeds/cenH3_(Mammalia).fasta → CURATED_SET/draft_seeds/cenH3_Mammalia.fasta b/...ED_SET/draft_seeds/cenH3_(Mammalia).fasta → CURATED_SET/draft_seeds/cenH3_Mammalia.fasta
diff --git a/...T/draft_seeds/cenH3_(Mammalia)_only.fasta → ...SET/draft_seeds/cenH3_Mammalia_only.fasta b/...T/draft_seeds/cenH3_(Mammalia)_only.fasta → ...SET/draft_seeds/cenH3_Mammalia_only.fasta
diff --git a/CURATED_SET/draft_seeds/cenH3_(Plants).fasta → CURATED_SET/draft_seeds/cenH3_Plants.fasta b/CURATED_SET/draft_seeds/cenH3_(Plants).fasta → CURATED_SET/draft_seeds/cenH3_Plants.fasta
diff --git a/.../draft_seeds/early_H2B_(Echinoidea).fasta → ...ET/draft_seeds/early_H2B_Echinoidea.fasta b/.../draft_seeds/early_H2B_(Echinoidea).fasta → ...ET/draft_seeds/early_H2B_Echinoidea.fasta
diff --git a/...T/draft_seeds/late_H2B_(Echinoidea).fasta → ...SET/draft_seeds/late_H2B_Echinoidea.fasta b/...T/draft_seeds/late_H2B_(Echinoidea).fasta → ...SET/draft_seeds/late_H2B_Echinoidea.fasta
diff --git a/..._seeds/macroH2A.1.s1_(Homo_sapiens).fasta → ...ft_seeds/macroH2A.1.s1_Homo_sapiens.fasta b/..._seeds/macroH2A.1.s1_(Homo_sapiens).fasta → ...ft_seeds/macroH2A.1.s1_Homo_sapiens.fasta
diff --git a/...raft_seeds/macroH2A.1.s1_(Mammalia).fasta → .../draft_seeds/macroH2A.1.s1_Mammalia.fasta b/...raft_seeds/macroH2A.1.s1_(Mammalia).fasta → .../draft_seeds/macroH2A.1.s1_Mammalia.fasta
diff --git a/...seeds/macroH2A.1.s1_(Mammalia)_only.fasta → ...t_seeds/macroH2A.1.s1_Mammalia_only.fasta b/...seeds/macroH2A.1.s1_(Mammalia)_only.fasta → ...t_seeds/macroH2A.1.s1_Mammalia_only.fasta
diff --git a/..._seeds/macroH2A.1.s2_(Homo_sapiens).fasta → ...ft_seeds/macroH2A.1.s2_Homo_sapiens.fasta b/..._seeds/macroH2A.1.s2_(Homo_sapiens).fasta → ...ft_seeds/macroH2A.1.s2_Homo_sapiens.fasta
diff --git a/...raft_seeds/macroH2A.1.s2_(Mammalia).fasta → .../draft_seeds/macroH2A.1.s2_Mammalia.fasta b/...raft_seeds/macroH2A.1.s2_(Mammalia).fasta → .../draft_seeds/macroH2A.1.s2_Mammalia.fasta
diff --git a/...seeds/macroH2A.1.s2_(Mammalia)_only.fasta → ...t_seeds/macroH2A.1.s2_Mammalia_only.fasta b/...seeds/macroH2A.1.s2_(Mammalia)_only.fasta → ...t_seeds/macroH2A.1.s2_Mammalia_only.fasta
diff --git a/...T/draft_seeds/macroH2A.1_(Mammalia).fasta → ...SET/draft_seeds/macroH2A.1_Mammalia.fasta b/...T/draft_seeds/macroH2A.1_(Mammalia).fasta → ...SET/draft_seeds/macroH2A.1_Mammalia.fasta
diff --git a/...ft_seeds/macroH2A.1_(Mammalia)_only.fasta → ...raft_seeds/macroH2A.1_Mammalia_only.fasta b/...ft_seeds/macroH2A.1_(Mammalia)_only.fasta → ...raft_seeds/macroH2A.1_Mammalia_only.fasta
diff --git a/...aft_seeds/macroH2A.2_(Homo_sapiens).fasta → ...draft_seeds/macroH2A.2_Homo_sapiens.fasta b/...aft_seeds/macroH2A.2_(Homo_sapiens).fasta → ...draft_seeds/macroH2A.2_Homo_sapiens.fasta
diff --git a/...T/draft_seeds/macroH2A.2_(Mammalia).fasta → ...SET/draft_seeds/macroH2A.2_Mammalia.fasta b/...T/draft_seeds/macroH2A.2_(Mammalia).fasta → ...SET/draft_seeds/macroH2A.2_Mammalia.fasta
diff --git a/...ft_seeds/macroH2A.2_(Mammalia)_only.fasta → ...raft_seeds/macroH2A.2_Mammalia_only.fasta b/...ft_seeds/macroH2A.2_(Mammalia)_only.fasta → ...raft_seeds/macroH2A.2_Mammalia_only.fasta
diff --git a/.../draft_seeds/sperm_H2B_(Echinoidea).fasta → ...ET/draft_seeds/sperm_H2B_Echinoidea.fasta b/.../draft_seeds/sperm_H2B_(Echinoidea).fasta → ...ET/draft_seeds/sperm_H2B_Echinoidea.fasta
diff --git a/CURATED_SET/html/tree_d3.html b/CURATED_SET/html/tree_d3.html
@@ -309,7 +309,7 @@ <h1>Multiple sequence alignment will appear below</h1>
 
  var m = msa({
   el: rootDiv,
- importURL: "../seeds/"+name+".fasta",
+ importURL: "../draft_seeds/"+name.replace(/[()]/g, '')+".fasta",
  // seqs:seqs,
   all: true,
   vis: {
@@ -400,7 +400,7 @@ <h1>Multiple sequence alignment will appear below</h1>
 
 //Now we will add consensus with features
 //first we need to get features and load them.
-xhr("../seeds/"+name+".gff3", function(err, request, body) {
+xhr("../draft_seeds/"+name.replace(/[()]/g, '')+".gff3", function(err, request, body) {
   var features = gffParser.parseSeqs(body);
   m.seqs.addFeatures(features);
 
@@ -421,7 +421,7 @@ <h1>Multiple sequence alignment will appear below</h1>
         }
         m.seqs.unshift(seqc);
   //After that we add a tree
- m.importURL("../seeds/"+name+".tree", function(){
+ m.importURL("../draft_seeds/"+name.replace(/[()]/g, '')+".tree", function(){
  console.log("tree loaded");
  //Trigger SeqLogo from menu, see msa.js:24482 why we need to do this hack!
  console.log(defMenu.views["40_vis"]._nodes[3].callback());