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Invitae

Invitae is a healthcare technology company

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  1. variant-search-exercise variant-search-exercise Public

    A Python + Django and React programming exercise

    Python 2 9

  2. hgvs hgvs Public

    Forked from biocommons/hgvs

    Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

    Python 1 1

  3. variant-search-coding-assignment variant-search-coding-assignment Public

    1 13

  4. aims_inference aims_inference Public

    Python 1

  5. SpliceAI SpliceAI Public

    Forked from Illumina/SpliceAI

    A deep learning-based tool to identify splice variants

    Python 1 2

  6. pangolin pangolin Public

    Forked from broadinstitute/pangolin

    refactoring pangolin to run splicing prediction on gnomAD v3 & v4 variants

    Python 1 3

Repositories

Showing 10 of 46 repositories
  • VarDictJava Public Forked from AstraZeneca-NGS/VarDictJava

    VarDict Java port

    invitae/VarDictJava’s past year of commit activity
    Java 0 MIT 57 0 1 Updated Dec 13, 2024
  • uta Public Forked from biocommons/uta

    Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image

    invitae/uta’s past year of commit activity
    Python 1 Apache-2.0 26 0 0 Updated Dec 9, 2024
  • needlestack Public Forked from IARCbioinfo/needlestack

    Multi-sample somatic variant caller

    invitae/needlestack’s past year of commit activity
    R 0 GPL-3.0 15 0 1 Updated Dec 4, 2024
  • bioutils Public Forked from biocommons/bioutils

    bioutils provides some common tools and lookup tables used primarly by the hgvs and uta packages

    invitae/bioutils’s past year of commit activity
    Python 0 18 0 0 Updated Nov 14, 2024
  • variant-search-exercise Public

    A Python + Django and React programming exercise

    invitae/variant-search-exercise’s past year of commit activity
    Python 2 9 1 0 Updated May 2, 2024
  • EMP-Connector Public
    invitae/EMP-Connector’s past year of commit activity
    Java 0 BSD-3-Clause 0 0 2 Updated Dec 5, 2023
  • pangolin Public Forked from broadinstitute/pangolin

    refactoring pangolin to run splicing prediction on gnomAD v3 & v4 variants

    invitae/pangolin’s past year of commit activity
    Python 1 GPL-3.0 33 0 0 Updated Oct 5, 2023
  • variant-search-exercise-node Public
    invitae/variant-search-exercise-node’s past year of commit activity
    JavaScript 0 1 0 0 Updated May 15, 2023
  • SpliceAI Public Forked from Illumina/SpliceAI

    A deep learning-based tool to identify splice variants

    invitae/SpliceAI’s past year of commit activity
    Python 1 161 0 1 Updated Mar 23, 2023
  • debezium Public Forked from debezium/debezium

    Change data capture for a variety of databases. Please log issues at https://issues.redhat.com/browse/DBZ.

    invitae/debezium’s past year of commit activity
    Java 0 Apache-2.0 2,576 0 0 Updated Sep 12, 2022
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