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py38 compat
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ocefpaf committed Apr 11, 2024
1 parent d53d227 commit e44eda1
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Showing 6 changed files with 19 additions and 29 deletions.
7 changes: 2 additions & 5 deletions compliance_checker/cf/util.py
Original file line number Diff line number Diff line change
@@ -1,11 +1,11 @@
import importlib.resources
import itertools
import os
import sys
from pkgutil import get_data

import requests
from cf_units import Unit
from importlib_resources import files
from lxml import etree
from netCDF4 import Dataset

Expand Down Expand Up @@ -284,10 +284,7 @@ def download_cf_standard_name_table(version, location=None):
if (
location is None
): # This case occurs when updating the packaged version from command line
location = (
importlib.resources.files("compliance_checker")
/ "data/cf-standard-name-table.xml"
)
location = files("compliance_checker") / "data/cf-standard-name-table.xml"

if version == "latest":
url = "http://cfconventions.org/Data/cf-standard-names/current/src/cf-standard-name-table.xml"
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4 changes: 2 additions & 2 deletions compliance_checker/cfutil.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,13 +3,13 @@
compliance_checker/cfutil.py
"""
import csv
import importlib.resources
import re
import warnings
from collections import defaultdict
from functools import lru_cache, partial

from cf_units import Unit
from importlib_resources import files

_UNITLESS_DB = None
_SEA_NAMES = None
Expand Down Expand Up @@ -128,7 +128,7 @@ def get_sea_names():
if _SEA_NAMES is None:
buf = {}
with open(
importlib.resources.files("compliance_checker") / "data/seanames.csv",
files("compliance_checker") / "data/seanames.csv",
) as f:
reader = csv.reader(f)
for code, sea_name in reader:
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6 changes: 2 additions & 4 deletions compliance_checker/tests/conftest.py
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
import importlib.resources
import os
import subprocess
from itertools import chain

import pytest
from importlib_resources import files
from netCDF4 import Dataset

from compliance_checker.cf import util
Expand All @@ -26,9 +26,7 @@ def static_files(cdl_stem):
Returns the Path to a valid nc dataset\n
replaces the old STATIC_FILES dict
"""
datadir = (
importlib.resources.files("compliance_checker").joinpath("tests/data").resolve()
)
datadir = files("compliance_checker").joinpath("tests/data").resolve()
assert datadir.exists(), f"{datadir} not found"

cdl_paths = glob_down(datadir, f"{cdl_stem}.cdl", 3)
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5 changes: 3 additions & 2 deletions compliance_checker/tests/resources.py
Original file line number Diff line number Diff line change
@@ -1,12 +1,13 @@
import importlib.resources
import subprocess

from importlib_resources import files


def get_filename(path):
"""
Returns the path to a valid dataset
"""
filename = importlib.resources.files("compliance_checker") / path
filename = files("compliance_checker") / path
nc_path = filename.with_suffix(".nc")
if not nc_path.exists():
generate_dataset(filename, nc_path)
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25 changes: 9 additions & 16 deletions compliance_checker/tests/test_suite.py
Original file line number Diff line number Diff line change
@@ -1,30 +1,23 @@
import importlib.resources
import os
import unittest
from pathlib import Path

import numpy as np
from importlib_resources import files

from compliance_checker.acdd import ACDDBaseCheck
from compliance_checker.base import BaseCheck, GenericFile, Result
from compliance_checker.suite import CheckSuite

static_files = {
"2dim": importlib.resources.files("compliance_checker") / "tests/data/2dim-grid.nc",
"bad_region": importlib.resources.files("compliance_checker")
/ "tests/data/bad_region.nc",
"bad_data_type": importlib.resources.files("compliance_checker")
/ "tests/data/bad_data_type.nc",
"test_cdl": importlib.resources.files("compliance_checker")
/ "tests/data/test_cdl.cdl",
"test_cdl_nc": importlib.resources.files("compliance_checker")
/ "tests/data/test_cdl_nc_file.nc",
"empty": importlib.resources.files("compliance_checker")
/ "tests/data/non-comp/empty.file",
"ru07": importlib.resources.files("compliance_checker")
/ "tests/data/ru07-20130824T170228_rt0.nc",
"netCDF4": importlib.resources.files("compliance_checker")
/ "tests/data/test_cdl_nc4_file.cdl",
"2dim": files("compliance_checker") / "tests/data/2dim-grid.nc",
"bad_region": files("compliance_checker") / "tests/data/bad_region.nc",
"bad_data_type": files("compliance_checker") / "tests/data/bad_data_type.nc",
"test_cdl": files("compliance_checker") / "tests/data/test_cdl.cdl",
"test_cdl_nc": files("compliance_checker") / "tests/data/test_cdl_nc_file.nc",
"empty": files("compliance_checker") / "tests/data/non-comp/empty.file",
"ru07": files("compliance_checker") / "tests/data/ru07-20130824T170228_rt0.nc",
"netCDF4": files("compliance_checker") / "tests/data/test_cdl_nc4_file.cdl",
}


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1 change: 1 addition & 0 deletions requirements.txt
Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
cf-units>=2
cftime>=1.1.0
importlib-resources # drop this when dropping Python 3.8
isodate>=0.6.1
jinja2>=2.7.3
lxml>=3.2.1
Expand Down

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