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Update cpt.yaml
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Added back cpt_intersect_adjacent and cpt_related_genomes_prot for repeatability issues with comments, removed phageterm, phagetermvirome and defense_finder, will deal with these in a future PR. Net change is adding 3 new CPT tools.
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jasonjgill authored Sep 6, 2024
1 parent e73c985 commit 7510ded
Showing 1 changed file with 10 additions and 11 deletions.
21 changes: 10 additions & 11 deletions cpt.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -63,11 +63,21 @@ tools:
- name: cpt_lipory
owner: cpt
tool_panel_section_label: Annotation

- name: cpt_intersect_adjacent
owner: cpt
tool_panel_section_label: Annotation
## deprecated tool, replaced by cpt_intersect_adj

- name: cpt_related_genomes_nuc
owner: cpt
tool_panel_section_label: Phylogenetics

- name: cpt_related_genomes_prot
owner: cpt
tool_panel_section_label: Phylogenetics
## deprecated tool, replaced by cpt_protein_blast_grouping

- name: cpt_xmfa_to_table
owner: cpt
tool_panel_section_label: Phylogenetics
Expand Down Expand Up @@ -132,14 +142,3 @@ tools:
owner: cpt
tool_panel_section_label: Annotation

- name: phageterm
owner: mmonot
tool_panel_section_label: Annotation

- name: phagetermvirome
owner: bioit_sciensano
tool_panel_section_label: Annotation

- name: defense_finder
owner: rplanel
tool_panel_section_label: Annotation

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