pypi! #75
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| # This is a basic workflow to help you get started with Actions | |
| name: Build documentation | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: [ main ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| build: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: "Prep anaconda" | |
| run: echo "ACTIONS_ALLOW_UNSECURE_COMMANDS=true" >> $GITHUB_ENV | |
| - name: Cache conda | |
| uses: actions/cache@v2 | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 1 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ | |
| hashFiles('docs_environment.yml') }} | |
| # Dependencies may need to be installed via conda instead, since pyemma at least doesn't like pip | |
| # - uses: goanpeca/setup-miniconda@v1 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniconda-version: "latest" | |
| activate-environment: test_env | |
| environment-file: docs_environment.yml | |
| python-version: 3.7 | |
| channel-priority: strict | |
| auto-activate-base: false | |
| use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
| - name: "Finish prepping anaconda" | |
| run: echo "ACTIONS_ALLOW_UNSECURE_COMMANDS=false" >> $GITHUB_ENV | |
| - name: "Install sphinx" | |
| run: "sudo apt-get update -y && sudo apt-get install python3-sphinx" | |
| - name: "Render with sphinx" | |
| run: "cd docs && sphinx-build -b html . build && cd .. " | |
| # Publish built docs to gh-pages branch. | |
| # =============================== | |
| - name: Commit documentation changes | |
| run: | | |
| git clone https://github.com/jcopperm/celltraj.git --branch gh-pages --single-branch gh-pages | |
| cp -r docs/build/* gh-pages/ | |
| mkdir -p gh-pages/build | |
| ls docs | |
| ls docs/build | |
| cp -r docs/build/* gh-pages/build | |
| cd gh-pages | |
| touch .nojekyll | |
| mkdir -p build | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Action" | |
| git add . | |
| git add -f build | |
| git commit -m "Update documentation" -a || true | |
| # The above command will fail if no changes were present, so we ignore | |
| # that | |
| - name: Push changes | |
| uses: ad-m/github-push-action@master | |
| with: | |
| branch: gh-pages | |
| directory: gh-pages | |
| github_token: ${{ secrets.GITHUB_TOKEN }} |