Deprecation warnings on SSSRFinder classes.

johnmay · Feb 14, 2017 · b612395 · b612395
1 parent 7f88ee8
commit b612395
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Showing 5 changed files with 11 additions and 6 deletions.
diff --git a/legacy/src/main/java/org/openscience/cdk/ringsearch/Queue.java b/legacy/src/main/java/org/openscience/cdk/ringsearch/Queue.java
@@ -31,7 +31,9 @@
  *
  * @cdk.module standard
  * @cdk.githash
+ * @deprecated internal implemenation detail from SSSRFinder, do not use
  */
+@Deprecated
 public class Queue extends Vector {
 
     private static final long serialVersionUID = 1008167867733841614L;

diff --git a/legacy/src/main/java/org/openscience/cdk/ringsearch/SSSRFinder.java b/legacy/src/main/java/org/openscience/cdk/ringsearch/SSSRFinder.java
@@ -53,8 +53,10 @@
  * @cdk.keyword smallest-set-of-rings
  * @cdk.keyword ring search
  * @cdk.dictref blue-obelisk:findSmallestSetOfSmallestRings_Berger
- *
+ * @deprecated Use the {@link org.openscience.cdk.graph.Cycles} API
+ *             {@link org.openscience.cdk.graph.Cycles#sssr(IAtomContainer)}
  */
+@Deprecated
 public class SSSRFinder {
 
     private IAtomContainer atomContainer;

diff --git a/legacy/src/main/java/org/openscience/cdk/ringsearch/cyclebasis/CycleBasis.java b/legacy/src/main/java/org/openscience/cdk/ringsearch/cyclebasis/CycleBasis.java
@@ -52,9 +52,9 @@
  *
  * @cdk.module standard
  * @cdk.githash
- *
+ * @deprecated internal implemenation detail from SSSRFinder, do not use
  */
-
+@Deprecated
 public class CycleBasis {
 
     //private List cycles = new Vector();

diff --git a/legacy/src/main/java/org/openscience/cdk/ringsearch/cyclebasis/SimpleCycle.java b/legacy/src/main/java/org/openscience/cdk/ringsearch/cyclebasis/SimpleCycle.java
@@ -44,8 +44,9 @@
  *
  * @cdk.keyword smallest-set-of-rings
  * @cdk.keyword ring search
- *
+ * @deprecated internal implemenation detail from SSSRFinder, do not use
  */
+@Deprecated
 public class SimpleCycle extends UndirectedSubgraph {
 
     private static final long serialVersionUID = -3330742084804445688L;

diff --git a/legacy/src/main/java/org/openscience/cdk/ringsearch/cyclebasis/SimpleCycleBasis.java b/legacy/src/main/java/org/openscience/cdk/ringsearch/cyclebasis/SimpleCycleBasis.java
@@ -56,9 +56,9 @@
  *
  * @cdk.module standard
  * @cdk.githash
- *
+ * @deprecated internal implemenation detail from SSSRFinder, do not use
  */
-
+@Deprecated
 public class SimpleCycleBasis {
 
     private List              edgeList;