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1. Postmortem_MRI_Converter Postmortem_MRI_Converter Public

   This is a collection of several scripts that handle scanned .nii images from postmortem brains (including single hemispheres), converting them into full brains with coloration equivalent to a T1-we…

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2. myflix myflix Public

   Forked from gotealeaf/myflix

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3. Neurolucida_Explorer_Output_Handler Neurolucida_Explorer_Output_Handler Public

   Scripts that take Neurolucida Explorer single-cell output and produce .xls files with multiple cases and several calculations completed

   Python

4. Stereo_Investigator_Nucleator_Bin Stereo_Investigator_Nucleator_Bin Public

   Customizably bins the nucleator output in Stereo Investigator

   Python

5. Spatial_Pattern_Analysis Spatial_Pattern_Analysis Public

   Produces density-corrected values on the organization of cells and other data points.

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6. Cell-Counter Cell-Counter Public

   This is a GUI program I developed to mark cellular coordinates in 2-d images. It is in ALPHA. Many features are missing or buggy. I've also included a folder with 40 image files, 30 with marked coo…

   Python