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  1. PCR-cDNAseq PCR-cDNAseq Public

    Code for processing, mapping and counting reads generated using ONT PCR-cDNA-seq (PCS111)

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  2. DESeq2 DESeq2 Public

    R Script for differential gene expression identification using featuresCount count matrix.DESeq2 data table,

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  3. DirectRNAseq DirectRNAseq Public

    Code for mapping and counting reads generated by ONT Direct RNA-seq (RNA002).

    Python

  4. DTU DTU Public

    RNAseq differential transcript usage analysis workflow

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