ScreenBEAM2

Gene-level meta-analysis of high-throughput functional genomics (RNAi or CRISPR) screens.

Install

git clone to your target folder:

git clone https://github.com/jyyulab/ScreenBEAM2.git

In R, setwd("/path/to/ScreenBEAM2/")

devtools::install(pkg='.', dependencies = T)
devtools::install_deps(pkg = ".", dependencies = TRUE) ## Install package dependencies if needed.

manual: ScreenBEAM2_0.1.0.pdf tutorial: https://jyyulab.github.io/ScreenBEAM2/

in inst/demo_scripts/demo_pipeline.R This is a demo for internal use only!