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1. puffin puffin Public

   deep learning-inspired explainable sequence model for transcription initiation

   Python 91 7

2. ddsm ddsm Public

   Dirichlet Diffusion Score Model for Biological Sequence Generation.

   Jupyter Notebook 45 9

3. orca orca Public

   sequence-based prediction of multiscale genome structure from kilobase to whole-chromosome scale

   Python 81 21

4. Multiplexer Multiplexer Public

   Jupyter Notebook 1

5. quasildr quasildr Public

   Quasilinear data representations for single-cell omics data analysis

   Jupyter Notebook 42 3

6. Seqstr Seqstr Public

   Python 4 1