Merge pull request #86 from kbss-cvut/84-migrate-to-yml

Migrate to yml

src/main/resources/application.yml

@@ -0,0 +1,56 @@
+server:
+  servlet:
+    context-path: /record-manager
+
+management:
+  endpoints:
+    web:
+      exposure:
+        include: health
+
+persistenceDriver: cz.cvut.kbss.ontodriver.rdf4j.Rdf4jDataSou# URL of repository that holds main data of the application
+
+repositoryUrl: http://localhost:7200/repositories/record-manager-app
+
+formGenRepositoryUrl: http://localhost:7200/repositories/record-manager-formgen
+
+formGenServiceUrl: http://localhost:8080/s-pipes/service?_pId=transform&sgovRepositoryUrl=https%3A%2F%2Fgraphdb.onto.fel.cvut.cz%2Frepositories%2Fkodi-slovnik-gov-cz
+
+security:
+  sameSite: ""
+  provider: internal
+  oidc:
+    roleClaim: realm_access.roles
+  cors:
+    allowedOrigins: ""
+
+appContext: http://localhost:3000/record-manager
+
+smtp:
+  host: smtp.gmail.com
+  port: 587
+  user: [email protected]
+  password: AdminOrganization123
+
+email:
+  displayName: Record Manager
+  from: ""
+  replyTo: ""
+  cc: ""
+  bcc: ""
+  passwordResetSubject: Password Reset
+  passwordResetContent: >-
+    <div><p>Dear user {{username}}, </p><p>please set your new password here: {{link}} </p><p>Best regards, <br>StudyManager</p></div>
+  invitationSubject: Welcome to study
+  invitationContent: >-
+    <div><p>Dear {{name}}, </p><p>you have been invited to a study running at {{appContext}}. </p><p>Your username is: {{username}}. </p>\
+    <p>Please set your password here: {{link}} </p><p>Best regards, <br>StudyManager</p></div>
+  passwordChangeSubject: Password Change
+  passwordChangeContent: >-
+    <div><p>Dear user {{username}}, </p><p>your password has been changed. </p><p>Best regards, <br>RecordManager</p></div>
+  profileUpdateSubject: Profile updated by a study coordinator
+  profileUpdateContent: >-
+    <div><p>Dear user {{username}}, </p><p>your profile at {{appContext}} has been updated by a study coordinator. </p><p>Best regards, <br>RecordManager</p></div>
+
+records:
+  allowedRejectReason: true

src/test/java/cz/cvut/kbss/study/persistence/BaseDaoTestRunner.java

@@ -9,7 +9,7 @@
 import org.springframework.test.context.junit.jupiter.SpringExtension;
 
 @ExtendWith(SpringExtension.class)
-@ContextConfiguration(classes = {TestPersistenceConfig.class})
+@ContextConfiguration(classes = {TestPersistenceConfig.class}, initializers = {ConfigDataApplicationContextInitializer.class})
 @DirtiesContext(classMode = DirtiesContext.ClassMode.AFTER_EACH_TEST_METHOD)
 @ActiveProfiles("test")
 abstract public class BaseDaoTestRunner extends TransactionalTestRunner {

src/test/java/cz/cvut/kbss/study/persistence/ConfigDataApplicationContextInitializer.java

@@ -0,0 +1,23 @@
+package cz.cvut.kbss.study.persistence;
+
+import org.springframework.boot.DefaultBootstrapContext;
+import org.springframework.boot.DefaultPropertiesPropertySource;
+import org.springframework.boot.context.config.ConfigDataEnvironmentPostProcessor;
+import org.springframework.boot.env.RandomValuePropertySource;
+import org.springframework.context.ApplicationContextInitializer;
+import org.springframework.context.ConfigurableApplicationContext;
+import org.springframework.core.env.ConfigurableEnvironment;
+
+public class ConfigDataApplicationContextInitializer implements ApplicationContextInitializer<ConfigurableApplicationContext> {
+    public ConfigDataApplicationContextInitializer() {
+    }
+
+    public void initialize(ConfigurableApplicationContext applicationContext) {
+        ConfigurableEnvironment environment = applicationContext.getEnvironment();
+        RandomValuePropertySource.addToEnvironment(environment);
+        DefaultBootstrapContext bootstrapContext = new DefaultBootstrapContext();
+        ConfigDataEnvironmentPostProcessor.applyTo(environment, applicationContext, bootstrapContext, new String[0]);
+        bootstrapContext.close(applicationContext);
+        DefaultPropertiesPropertySource.moveToEnd(environment);
+    }
+}

src/test/java/cz/cvut/kbss/study/persistence/TestFormGenPersistenceFactory.java

@@ -9,22 +9,20 @@
 import jakarta.annotation.PostConstruct;
 import jakarta.annotation.PreDestroy;
 import org.springframework.beans.factory.annotation.Autowired;
+import org.springframework.boot.context.properties.EnableConfigurationProperties;
 import org.springframework.context.annotation.Bean;
 import org.springframework.context.annotation.Configuration;
 import org.springframework.context.annotation.Profile;
 import org.springframework.context.annotation.PropertySource;
 import org.springframework.core.env.Environment;
 
 @Configuration
-@PropertySource("classpath:application.properties")
+@EnableConfigurationProperties(cz.cvut.kbss.study.util.Configuration.class)
 @Profile("test")
 public class TestFormGenPersistenceFactory {
 
-    private static final String URL_PROPERTY = "test." + ConfigParam.FORM_GEN_REPOSITORY_URL;
-    private static final String DRIVER_PROPERTY = "test." + ConfigParam.PERSISTENCE_DRIVER;
-
     @Autowired
-    private Environment environment;
+    private cz.cvut.kbss.study.util.Configuration config;
 
     private EntityManagerFactory emf;
 
@@ -36,8 +34,8 @@ public EntityManagerFactory getEntityManagerFactory() {
     @PostConstruct
     private void init() {
         final Map<String, String> properties = TestPersistenceFactory.getDefaultProperties();
-        properties.put(JOPAPersistenceProperties.ONTOLOGY_PHYSICAL_URI_KEY, environment.getProperty(URL_PROPERTY));
-        properties.put(JOPAPersistenceProperties.DATA_SOURCE_CLASS, environment.getProperty(DRIVER_PROPERTY));
+        properties.put(JOPAPersistenceProperties.ONTOLOGY_PHYSICAL_URI_KEY, config.getFormGenRepositoryUrl());
+        properties.put(JOPAPersistenceProperties.DATA_SOURCE_CLASS, config.getPersistenceDriver());
         this.emf = Persistence.createEntityManagerFactory("formGenTestPU", properties);
     }
 

src/test/java/cz/cvut/kbss/study/persistence/TestPersistenceFactory.java

@@ -10,6 +10,7 @@
 import jakarta.annotation.PostConstruct;
 import jakarta.annotation.PreDestroy;
 import org.springframework.beans.factory.annotation.Autowired;
+import org.springframework.boot.context.properties.EnableConfigurationProperties;
 import org.springframework.context.annotation.Bean;
 import org.springframework.context.annotation.Configuration;
 import org.springframework.context.annotation.Primary;
@@ -24,14 +25,15 @@
 import static cz.cvut.kbss.ontodriver.config.OntoDriverProperties.DATA_SOURCE_USERNAME;
 
 @Configuration
-@PropertySource("classpath:application.properties")
+@EnableConfigurationProperties(cz.cvut.kbss.study.util.Configuration.class)
 @Profile("test")
 public class TestPersistenceFactory {
 
-    private static final String URL_PROPERTY = "test." + ConfigParam.REPOSITORY_URL;
-    private static final String DRIVER_PROPERTY = "test." + ConfigParam.PERSISTENCE_DRIVER;
-    private static final String USERNAME_PROPERTY = "test.username";
-    private static final String PASSWORD_PROPERTY = "test.password";
+    private static final String USERNAME_PROPERTY = "username";
+    private static final String PASSWORD_PROPERTY = "password";
+
+    @Autowired
+    private cz.cvut.kbss.study.util.Configuration config;
 
     @Autowired
     private Environment environment;
@@ -47,8 +49,8 @@ public EntityManagerFactory getEntityManagerFactory() {
     @PostConstruct
     private void init() {
         final Map<String, String> properties = getDefaultProperties();
-        properties.put(JOPAPersistenceProperties.ONTOLOGY_PHYSICAL_URI_KEY, environment.getProperty(URL_PROPERTY));
-        properties.put(JOPAPersistenceProperties.DATA_SOURCE_CLASS, environment.getProperty(DRIVER_PROPERTY));
+        properties.put(JOPAPersistenceProperties.ONTOLOGY_PHYSICAL_URI_KEY, config.getRepositoryUrl());
+        properties.put(JOPAPersistenceProperties.DATA_SOURCE_CLASS,config.getPersistenceDriver());
         if (environment.getProperty(USERNAME_PROPERTY) != null) {
             properties.put(DATA_SOURCE_USERNAME, environment.getProperty(USERNAME_PROPERTY));
             properties.put(DATA_SOURCE_PASSWORD, environment.getProperty(PASSWORD_PROPERTY));

src/test/java/cz/cvut/kbss/study/service/BaseServiceTestRunner.java

@@ -6,6 +6,7 @@
 import cz.cvut.kbss.study.environment.generator.Generator;
 import cz.cvut.kbss.study.model.Institution;
 import cz.cvut.kbss.study.model.User;
+import cz.cvut.kbss.study.persistence.ConfigDataApplicationContextInitializer;
 import cz.cvut.kbss.study.persistence.dao.InstitutionDao;
 import cz.cvut.kbss.study.persistence.dao.UserDao;
 import org.junit.jupiter.api.BeforeEach;
@@ -19,7 +20,7 @@
 import org.springframework.test.context.junit.jupiter.SpringExtension;
 
 @ExtendWith(SpringExtension.class)
-@ContextConfiguration(classes = {TestServiceConfig.class, TestPersistenceConfig.class})
+@ContextConfiguration(classes = {TestServiceConfig.class, TestPersistenceConfig.class}, initializers = {ConfigDataApplicationContextInitializer.class})
 @DirtiesContext(classMode = DirtiesContext.ClassMode.AFTER_EACH_TEST_METHOD)
 @ActiveProfiles("test")
 public abstract class BaseServiceTestRunner extends TransactionalTestRunner {

src/test/resources/application.yml

@@ -0,0 +1,4 @@
+persistenceDriver: cz.cvut.kbss.ontodriver.rdf4j.Rdf4jDataSource
+repositoryUrl: study-test-repository
+formGenRepositoryUrl: test-formGen-repository
+formGenServiceUrl: http://localhost:8081/formGenerator