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diff --git a/...9a5d7/warming_levels/cmip5/csv/cmip5_warming_levels_one_ens_1850_1900_no_bounds_check.csv b/...9a5d7/warming_levels/cmip5/csv/cmip5_warming_levels_one_ens_1850_1900_no_bounds_check.csv
diff --git a/...arming_levels-fc9a5d7/warming_levels/cmip5/csv/cmip5_warming_levels_one_ens_1861_1900.csv b/...arming_levels-fc9a5d7/warming_levels/cmip5/csv/cmip5_warming_levels_one_ens_1861_1900.csv
diff --git a/...arming_levels-fc9a5d7/warming_levels/cmip5/csv/cmip5_warming_levels_one_ens_1995_2014.csv b/...arming_levels-fc9a5d7/warming_levels/cmip5/csv/cmip5_warming_levels_one_ens_1995_2014.csv
diff --git a/...a5d7/warming_levels/cmip5_all_ens/cmip5_start_years_all_ens_1850_1900_no_bounds_check.txt b/...a5d7/warming_levels/cmip5_all_ens/cmip5_start_years_all_ens_1850_1900_no_bounds_check.txt
diff --git a/...ng_levels-fc9a5d7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1850_1900.yml b/...ng_levels-fc9a5d7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1850_1900.yml
diff --git a/...7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1850_1900_no_bounds_check.yml b/...7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1850_1900_no_bounds_check.yml
diff --git a/...ng_levels-fc9a5d7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1861_1900.yml b/...ng_levels-fc9a5d7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1861_1900.yml
diff --git a/...ng_levels-fc9a5d7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1995_2014.yml b/...ng_levels-fc9a5d7/warming_levels/cmip5_all_ens/cmip5_warming_levels_all_ens_1995_2014.yml
diff --git a/...evels-fc9a5d7/warming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1850_1900.csv b/...evels-fc9a5d7/warming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1850_1900.csv
diff --git a/...rming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1850_1900_no_bounds_check.csv b/...rming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1850_1900_no_bounds_check.csv
diff --git a/...evels-fc9a5d7/warming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1861_1900.csv b/...evels-fc9a5d7/warming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1861_1900.csv
diff --git a/...evels-fc9a5d7/warming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1995_2014.csv b/...evels-fc9a5d7/warming_levels/cmip5_all_ens/csv/cmip5_warming_levels_all_ens_1995_2014.csv
diff --git a/...ip_warming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1850_1900.yml b/...ip_warming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1850_1900.yml
diff --git a/...rming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1850_1900_grid.yml b/...rming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1850_1900_grid.yml
diff --git a/...ip_warming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1995_2014.yml b/...ip_warming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1995_2014.yml
diff --git a/...rming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1995_2014_grid.yml b/...rming_levels-fc9a5d7/warming_levels/cmip6/cmip6_warming_levels_one_ens_1995_2014_grid.yml
diff --git a/...arming_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1850_1900.csv b/...arming_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1850_1900.csv
diff --git a/...g_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1850_1900_grid.csv b/...g_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1850_1900_grid.csv
diff --git a/...arming_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1995_2014.csv b/...arming_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1995_2014.csv
diff --git a/...g_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1995_2014_grid.csv b/...g_levels-fc9a5d7/warming_levels/cmip6/csv/cmip6_warming_levels_one_ens_1995_2014_grid.csv
diff --git a/...ng_levels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1850_1900.yml b/...ng_levels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1850_1900.yml
diff --git a/...vels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1850_1900_grid.yml b/...vels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1850_1900_grid.yml
diff --git a/...ng_levels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1995_2014.yml b/...ng_levels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1995_2014.yml
diff --git a/...vels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1995_2014_grid.yml b/...vels-fc9a5d7/warming_levels/cmip6_all_ens/cmip6_warming_levels_all_ens_1995_2014_grid.yml
diff --git a/...evels-fc9a5d7/warming_levels/cmip6_all_ens/csv/cmip6_warming_levels_all_ens_1850_1900.csv b/...evels-fc9a5d7/warming_levels/cmip6_all_ens/csv/cmip6_warming_levels_all_ens_1850_1900.csv
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diff --git a/...evels-fc9a5d7/warming_levels/cmip6_all_ens/csv/cmip6_warming_levels_all_ens_1995_2014.csv b/...evels-fc9a5d7/warming_levels/cmip6_all_ens/csv/cmip6_warming_levels_all_ens_1995_2014.csv
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diff --git a/Data/in/fldr_mox_list.csv b/Data/in/fldr_mox_list.csv
diff --git a/Data/in/lookup_tables/ROMS_rho_points_Intersect.csv b/Data/in/lookup_tables/ROMS_rho_points_Intersect.csv
diff --git a/Data/in/lookup_tables/ROMSdef.Rdata b/Data/in/lookup_tables/ROMSdef.Rdata
diff --git a/Data/in/lookup_tables/STATION_LKUP_noObs.Rdata b/Data/in/lookup_tables/STATION_LKUP_noObs.Rdata
diff --git a/Data/in/lookup_tables/STRATA_AREA.Rdata b/Data/in/lookup_tables/STRATA_AREA.Rdata
diff --git a/Data/in/lookup_tables/Station_lkup2014.csv b/Data/in/lookup_tables/Station_lkup2014.csv
diff --git a/Data/in/lookup_tables/modlist.csv b/Data/in/lookup_tables/modlist.csv
diff --git a/Data/in/lookup_tables/var_defv2.csv b/Data/in/lookup_tables/var_defv2.csv
diff --git a/Data/in/lookup_tables/var_defv2.xlsx b/Data/in/lookup_tables/var_defv2.xlsx
diff --git a/Data/in/placeholder.R b/Data/in/placeholder.R
diff --git a/Data/out/.Rapp.history b/Data/out/.Rapp.history
diff --git a/Data/out/normlist.csv b/Data/out/normlist.csv
diff --git a/Data/out/srvy_vars.Rdata b/Data/out/srvy_vars.Rdata
diff --git a/Data/out/weekly_vars.Rdata b/Data/out/weekly_vars.Rdata
diff --git a/Data/shared/._grid_list.Rdata b/Data/shared/._grid_list.Rdata
diff --git a/Data/shared/base_data.Rdata b/Data/shared/base_data.Rdata
diff --git a/Data/shared/grid_list.Rdata b/Data/shared/grid_list.Rdata
diff --git a/Docs/.DS_Store b/Docs/.DS_Store
diff --git a/Docs/ACLIM2_setup.Rmd b/Docs/ACLIM2_setup.Rmd
diff --git a/Docs/ACLIM2_setup.docx b/Docs/ACLIM2_setup.docx
diff --git a/Docs/ACLIM2_setup.html b/Docs/ACLIM2_setup.html
diff --git a/Docs/ACLIM2_setup.md b/Docs/ACLIM2_setup.md
diff --git a/Docs/presentations/ACLIM2_generic_slides.pptx b/Docs/presentations/ACLIM2_generic_slides.pptx
diff --git a/Docs/presentations/ACLIM3_MHW.pptx b/Docs/presentations/ACLIM3_MHW.pptx
diff --git a/Docs/presentations/ACLIM3_MHW.qmd b/Docs/presentations/ACLIM3_MHW.qmd
@@ -0,0 +1,170 @@
+---
+title: "MHW_ACLIM3"
+editor: visual
+format:
+  pptx:
+    reference-doc: ACLIM3_template2.pptx
+---
+
+# Some stuff
+
+## Quarto
+
+<!-- Quarto enables you to weave together content and executable code into a finished presentation. To learn more about Quarto presentations see <https://quarto.org/docs/presentations/>. -->
+
+<!-- https://quarto.org/docs/presentations/powerpoint.html -->
+
+## Bullets
+
+When you click the **Render** button a document will be generated that includes:
+
+-   Content authored with markdown
+-   Output from executable code
+
+## Code
+
+When you click the **Render** button a presentation will be generated that includes both content and the output of embedded code. You can embed code like this:
+
+```{r}
+1 + 1
+```
+
+# Methods
+
+## MHW calculations
+
+## Slide with speaker notes
+
+- climatology was derived for each week based on average (and variance of) temperatures from `r ref_years[1]` to `r rev(ref_years)[1]`. 
+- MHW categories were determined as: Category 1 = 1 SD, Category 2 = 2 SD, etc.
+
+::: notes
+Speaker notes go here.
+:::
+
+# SEBS MHWs (bottom temp.)
+
+::: {.columns .onlytextwidth align="top"}
+::: {.column width="40%" align="left"}
+
+- presently,  20% of the time
+- with Carbon Mitigation (ssp126)    --> 70% of the time
+- without Carbon Mitigation (ssp585) --> 95% of the time
+- much higher rate of Cat. 5 MHW
+
+:::
+
+::: {.column width="60%" align="center"}
+![](../../Data/NotShared/MHW/p_mn_25yr_abrv_temp_bottom5m_SEBS.jpg)
+:::
+:::
+
+# NEBS MHWs (bottom temp.)
+
+::: {.columns .onlytextwidth align="top"}
+::: {.column width="40%" align="left"}
+
+- presently,  20% of the time
+- with Carbon Mitigation (ssp126)    --> 40% of the time
+- without Carbon Mitigation (ssp585) --> 70% of the time
+- much higher rate of Cat. 5 MHW
+
+:::
+
+::: {.column width="60%" align="center"}
+![](../../Data/NotShared/MHW/p_mn_25yr_abrv_temp_bottom5m_NEBS.jpg)
+:::
+:::
+# SEBS MHWs (bottom temp.)
+
+::: {.columns .onlytextwidth align="top"}
+::: {.column width="40%" align="left"}
+
+- presently,  20% of the time
+- with Carbon Mitigation (ssp126)    --> 70% of the time
+- without Carbon Mitigation (ssp585) --> 95% of the time
+- much higher rate of Cat. 5 MHW
+
+:::
+
+::: {.column width="60%" align="center"}
+![](../../Data/NotShared/MHW/p_mn_10yr_temp_bottom5m_SEBS.jpg)
+:::
+:::
+
+# NEBS MHWs (bottom temp.)
+
+::: {.columns .onlytextwidth align="top"}
+::: {.column width="40%" align="left"}
+
+- presently,  20% of the time
+- with Carbon Mitigation (ssp126)    --> 40% of the time
+- without Carbon Mitigation (ssp585) --> 70% of the time
+- much higher rate of Cat. 5 MHW
+
+:::
+
+::: {.column width="60%" align="center"}
+![](../../Data/NotShared/MHW/p_mn_10yr_temp_bottom5m_NEBS.jpg)
+:::
+:::
+
+
+
+# Historically (NEBS)
+
+::: {.columns .onlytextwidth align="top"}
+::: {.column width="40%" align="left"}
+
+- 
+- MHW uncommon winter in NEBS
+
+:::
+
+::: {.column width="60%" align="center"}
+![](../../Data/NotShared/MHW/temp_bottom5m/p_hind_NEBS.jpg)
+:::
+:::
+
+
+# Historically (SEBS)
+
+::: {.columns .onlytextwidth align="top"}
+::: {.column width="40%" align="left"}
+
+- 
+- MHW uncommon winter in NEBS
+
+:::
+
+::: {.column width="60%" align="center"}
+![](../../Data/NotShared/MHW/temp_bottom5m/p_hind_SEBS.jpg)
+:::
+:::
+
+
+# longer look - NEBS
+
+::: {.columns .onlytextwidth align="top"}
+
+::: {.column width="1%" align="left"}
+::: {.column width="990%" align="left"}
+
+
+![](../../Data/NotShared/MHW/temp_bottom5m/p_hind_NEBSlong.jpg)
+
+:::
+:::
+:::
+
+# longer look - SEBS
+
+::: {.columns .onlytextwidth align="top"}
+::: {.column width="1%" align="left"}
+::: {.column width="990%" align="left"}
+
+![](../../Data/NotShared/MHW/temp_bottom5m/p_hind_SEBSlong.jpg)
+
+:::
+:::
+:::
diff --git a/Docs/presentations/ACLIM3_template.pptx b/Docs/presentations/ACLIM3_template.pptx
diff --git a/Docs/presentations/ACLIM3_template2.pptx b/Docs/presentations/ACLIM3_template2.pptx
diff --git a/Docs/presentations/ACLIM_template.pptx b/Docs/presentations/ACLIM_template.pptx
diff --git a/ESR_ACLIM.docx b/ESR_ACLIM.docx
diff --git a/ESR_ACLIM.md b/ESR_ACLIM.md
diff --git a/ESR_ACLIM.pdf b/ESR_ACLIM.pdf