Scripts associated with Krug et al. 2022 Proc. Roy. Soc. B. paper on Panpulmonata (https://doi.org/10.1098/rspb.2021.1855)
fastral.sh - BASH script used to run fastral
genesortR_best_600.R and genesortR_best_900.R - R scripts used for the analyses based on the best 600 and 900 genes according to genesortR.
orthology_script.sh - BASH script used to select genes from output of OrthoFinder (this script was run in the OrthoFinder Orthogroup_Sequences folder)
sbatch-APRO.sh - Slurm script used to run ASTRAL
sbatch-TransDecoder.sh - Slurm script used to translate assembled transcriptomes to amino acids