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Common data exchange and reconstruction engine for MRI
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kvahed/codeare
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This is the COmmon Data Exchange and Rconstruction Engine (codeare). This software is a framework for live communication with MRI sequence and reconstruction software. It is distributed under der LGPL v3.0 BUILD & INSTALL For example: # cd codeare # mkdir build # cd build # cmake .. # make # make test # sudo make install Linux optimised compilation examples: (64bit Linux, Intel Composer XE 2015, MKL, MATLAB 2015a) # . /opt/intel/bin/compilervars.sh intel64 # export LD_LIBRARY_PATH=/opt/intel/lib/intel64:/opt/intel/mkl/lib/intel64 # cd codeare # mkdir build # cd build # cmake -DCMAKE_C_COMPILER=icc \ -DCMAKE_CXX_COMPILER=icpc \ -DBLA_VENDOR=Intel10_64lp \ -DMATLAB_ROOT=/usr/local/MATLAB/R2015a .. (64bit Linux, ACML 6.1, MATLAB 2015a) # cd codeare # mkdir build # cd build # cmake -DBLA_VENDOR=ACML_MP \ -DBLAS_acml_mv_LIBRARY=/opt/acml/gfortran64_mp/lib/libacml_mp.so \ -DMATLAB_ROOT=/usr/local/MATLAB/R2015a .. Test runs: Mac OS X, Quad-core Intel Core i7 @ 2.5GHz Accelerate framework: 17.8s Ubuntu Linux, 12-core Intel Xeon E5-2680v3 @ 2.50GHz Test run On Intel Xeon E5-2680v3 @ 2.50GHz: MKL: 26.0s ACML: 28.0s OpenBLAS + ATLAS: 29.2s Ubuntu Linux, 16-core AMD Opteron 6300 @ 2.4GHz ACML: 42.7s MKL: 43.2s OpenBLAS + ATLAS: 46.6s Windows 8.1, 4-core Core i5 @ 1.9GHz MKL 15.0: 42.7s For more information refer to http://codeare.org
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