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Package: IRTShiny | ||
Type: Package | ||
Title: Item Responce Theory via Shiny | ||
Version: 1.0 | ||
Date: 2014-11-24 | ||
Version: 1.1 | ||
Date: 2015-09-19 | ||
Author: William Kyle Hamilton <[email protected]>, Atsushi Mizumoto | ||
<[email protected]> | ||
Maintainer: William Kyle Hamilton <[email protected]> | ||
Description: Interactive shiny application for running Item Response Theory | ||
analysis. | ||
License: GPL-3 | ||
Depends: | ||
Depends: R (>= 3.0.3) | ||
Imports: | ||
shiny, | ||
shinyAce, | ||
beeswarm, | ||
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Version: 1.0 | ||
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RestoreWorkspace: Default | ||
SaveWorkspace: Default | ||
AlwaysSaveHistory: Default | ||
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EnableCodeIndexing: Yes | ||
UseSpacesForTab: Yes | ||
NumSpacesForTab: 2 | ||
Encoding: UTF-8 | ||
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RnwWeave: Sweave | ||
LaTeX: pdfLaTeX | ||
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BuildType: Package | ||
PackageUseDevtools: Yes | ||
PackageInstallArgs: --no-multiarch --with-keep.source | ||
PackageCheckArgs: --as-cran |
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# CHANGES TO IRTShiny 1.1 # | ||
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## SIGNIFICANT USER-VISIBILE CHANGES ## | ||
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* Changed UI for IRTShiny, using navbarPage option in Shiny. | ||
* Updated About section. | ||
* Added icons throughout UI. | ||
* Online demo can be found at http://kylehamilton.net/shiny/IRTShiny/ |
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@@ -3,10 +3,10 @@ library(shinyAce) | |
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shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | ||
shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.1", | ||
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# ########## Adding loading message ######### | ||
# | ||
# | ||
# tags$head(tags$style(type="text/css", " | ||
# #loadmessage { | ||
# position: fixed; | ||
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@@ -22,10 +22,10 @@ shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | |
# z-index: 105; | ||
# } | ||
# ")), | ||
# | ||
# | ||
# conditionalPanel(condition="$('html').hasClass('shiny-busy')", | ||
# tags$div("Loading...",id="loadmessage")), | ||
# | ||
# | ||
# ########## Added up until here ########## | ||
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@@ -45,7 +45,7 @@ shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | |
br(), | ||
actionButton("quit", "Quit", icon("sign-out")), | ||
helpText("Press Quit to exit the application") | ||
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), | ||
br(), | ||
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@@ -116,16 +116,16 @@ shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | |
), | ||
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# tabPanel("Model options", icon = icon("line-chart", lib = "font-awesome"), | ||
# | ||
# | ||
# radioButtons("cormeasures", strong("Correlation model measures"), | ||
# c("raw correlation coefficient" = "COR", | ||
# "raw correlation coefficient corrected for its slight negative bias" = "UCOR", | ||
# "Fisherr-to-z transformed correlation coefficient" = "ZCOR" | ||
# ), selected = "ZCOR"), | ||
# p(h6('Fishes r-to-z transformed correlation coefficient is the default estimator for the metafor package')), | ||
# | ||
# | ||
# verbatimTextOutput('cormeasures.out') | ||
# | ||
# | ||
# )), | ||
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@@ -210,16 +210,16 @@ shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | |
numericInput("plot.item", "Indicate which item to plot:", 1), | ||
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plotOutput("polyICC"), | ||
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br(), | ||
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plotOutput("polyIIC"), | ||
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br(), | ||
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plotOutput("polyTIC"), | ||
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br(), | ||
br(), | ||
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@@ -232,58 +232,58 @@ shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | |
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tabPanel("Binary (1-0) Data Converter", icon = icon("table", lib = "font-awesome"), | ||
strong('Option:'), | ||
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checkboxInput("colname", label = "The input data includes variable names (the header) in the first row.", TRUE), | ||
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br(), | ||
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p('Note: Input values (either numeric or character) must be separated by tabs. Copy and paste from Excel/Numbers.'), | ||
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aceEditor("text", value="i01\ti02\ti03\ti04\ti05\ti06\ti07\ti08\ti09\ti10\ti11\ti12\ti13\ti14\ti15\ti16\ti17\ti18\ti19\ti20\nA\tB\tB\tB\tB\tC\tB\tC\tB\tD\tD\tC\tA\tB\tA\tD\tB\tD\tA\tC\nC\tD\tA\tD\tC\tB\tD\tB\tD\tA\tD\tD\tA\tB\tC\tC\tC\tA\tD\tC\nB\tD\tC\tD\tA\tB\tA\tC\tB\tD\tB\tA\tA\tD\tD\tA\tB\tC\tB\tB\nC\tC\tD\tD\tD\tA\tA\tD\tD\tD\tA\tB\tC\tB\tD\tB\tC\tB\tC\tA\nA\tA\tA\tD\tA\tA\tD\tB\tA\tC\tA\tD\tC\tC\tC\tC\tA\tA\tA\tB\nA\tA\tB\tC\tC\tA\tA\tA\tA\tA\tB\tC\tC\tC\tC\tB\tD\tC\tD\tD\nA\tA\tB\tA\tA\tA\tD\tB\tC\tC\tB\tC\tD\tA\tB\tD\tB\tB\tB\tD\nA\tC\tA\tD\tC\tA\tD\tA\tA\tA\tD\tD\tC\tC\tB\tA\tD\tC\tA\tD\nD\tB\tA\tD\tD\tA\tD\tB\tB\tA\tB\tB\tB\tC\tA\tA\tD\tA\tC\tB\nC\tC\tA\tC\tB\tC\tD\tC\tA\tA\tD\tD\tA\tA\tB\tC\tB\tB\tC\tC\nD\tA\tC\tB\tD\tA\tD\tB\tD\tA\tA\tD\tD\tC\tA\tC\tD\tC\tA\tD\nA\tD\tA\tD\tC\tA\tA\tA\tC\tD\tB\tB\tB\tA\tA\tC\tC\tD\tC\tC\nD\tC\tB\tA\tD\tA\tD\tB\tB\tA\tB\tD\tC\tC\tC\tC\tD\tA\tB\tC\nD\tC\tC\tD\tA\tA\tD\tB\tD\tB\tD\tD\tC\tB\tB\tB\tD\tB\tC\tB\nD\tC\tA\tD\tD\tA\tD\tB\tD\tA\tA\tC\tC\tC\tB\tC\tB\tA\tA\tB\nB\tC\tB\tC\tB\tB\tD\tD\tA\tA\tB\tA\tC\tD\tD\tB\tA\tA\tB\tC\nD\tA\tA\tA\tD\tD\tB\tC\tB\tA\tB\tA\tD\tB\tD\tC\tC\tD\tD\tC\nC\tD\tB\tC\tC\tA\tD\tC\tC\tB\tC\tA\tC\tA\tA\tC\tC\tB\tA\tC\nD\tB\tA\tC\tD\tB\tD\tB\tD\tC\tD\tD\tA\tC\tA\tD\tC\tD\tD\tD\nA\tC\tA\tD\tB\tC\tC\tD\tD\tC\tA\tB\tC\tC\tA\tD\tB\tC\tA\tB\nD\tC\tA\tD\tB\tA\tD\tA\tA\tA\tA\tD\tC\tC\tC\tC\tB\tB\tD\tD\nB\tA\tB\tB\tB\tA\tD\tD\tD\tD\tD\tD\tB\tB\tB\tD\tB\tD\tC\tC\nB\tC\tC\tA\tC\tC\tD\tB\tD\tA\tC\tD\tD\tA\tA\tA\tC\tB\tD\tC\nA\tC\tA\tA\tA\tB\tD\tB\tA\tA\tC\tC\tC\tC\tA\tB\tA\tB\tB\tB\nD\tD\tD\tB\tC\tA\tD\tB\tC\tA\tD\tD\tB\tD\tB\tC\tB\tA\tB\tA\nA\tD\tA\tB\tA\tA\tB\tC\tB\tB\tA\tA\tB\tA\tC\tA\tD\tB\tD\tB\nB\tD\tD\tA\tC\tB\tD\tD\tA\tA\tB\tD\tC\tA\tA\tD\tD\tA\tD\tD\nD\tC\tD\tB\tA\tA\tB\tC\tC\tB\tC\tD\tC\tC\tB\tD\tA\tB\tC\tB\nD\tB\tD\tB\tD\tA\tD\tC\tD\tD\tC\tD\tC\tD\tD\tB\tC\tC\tB\tD\nB\tB\tD\tC\tD\tA\tB\tB\tB\tB\tB\tC\tA\tC\tC\tA\tB\tA\tB\tA\nD\tC\tC\tC\tC\tA\tD\tA\tB\tA\tC\tD\tC\tC\tB\tA\tA\tC\tB\tB\nB\tA\tA\tB\tD\tA\tA\tD\tD\tA\tA\tC\tD\tA\tD\tA\tA\tC\tB\tA\nB\tA\tA\tB\tB\tC\tB\tA\tC\tA\tA\tC\tD\tD\tB\tD\tA\tB\tB\tB\nD\tA\tC\tB\tB\tA\tC\tB\tB\tD\tB\tD\tC\tA\tA\tA\tC\tD\tD\tD\nB\tC\tB\tA\tD\tA\tD\tB\tA\tA\tD\tB\tC\tA\tC\tB\tA\tB\tC\tC\nA\tA\tC\tB\tA\tA\tC\tB\tB\tC\tD\tA\tB\tC\tA\tD\tA\tB\tB\tD\nD\tC\tA\tC\tA\tA\tD\tB\tC\tB\tA\tD\tC\tB\tD\tC\tD\tD\tC\tA\nD\tC\tC\tB\tA\tA\tD\tB\tC\tB\tD\tD\tB\tA\tD\tA\tD\tC\tD\tD\nB\tC\tB\tC\tA\tA\tD\tB\tA\tA\tA\tC\tD\tB\tD\tC\tB\tD\tC\tC\nD\tC\tA\tB\tD\tA\tD\tA\tB\tB\tC\tC\tC\tA\tA\tA\tC\tC\tA\tC\nC\tC\tD\tC\tB\tD\tA\tC\tD\tA\tC\tB\tA\tD\tD\tA\tB\tD\tA\tC\nC\tD\tB\tD\tA\tA\tC\tB\tC\tA\tB\tD\tC\tD\tC\tA\tD\tC\tB\tA\nC\tD\tC\tB\tB\tA\tD\tB\tD\tA\tD\tD\tC\tB\tD\tB\tB\tA\tA\tB\nB\tB\tA\tB\tB\tA\tD\tB\tC\tC\tD\tB\tC\tC\tD\tA\tD\tC\tD\tC\nD\tB\tD\tC\tC\tA\tD\tD\tB\tA\tC\tA\tC\tC\tA\tB\tC\tC\tA\tA\nD\tA\tD\tA\tA\tA\tD\tB\tD\tB\tB\tB\tA\tB\tB\tC\tC\tB\tB\tA\nD\tC\tA\tD\tD\tA\tD\tB\tD\tA\tB\tD\tC\tC\tB\tA\tD\tA\tB\tB\nD\tC\tA\tD\tB\tA\tD\tB\tD\tA\tA\tD\tC\tC\tB\tB\tD\tA\tC\tB\nD\tC\tD\tA\tB\tA\tD\tB\tD\tD\tA\tD\tC\tD\tB\tC\tD\tA\tA\tB\nA\tB\tA\tB\tA\tA\tD\tB\tA\tC\tC\tB\tC\tD\tB\tD\tC\tA\tD\tA\nB\tB\tA\tB\tC\tA\tD\tA\tB\tA\tC\tD\tC\tC\tC\tB\tB\tA\tD\tD\nD\tC\tC\tD\tD\tA\tD\tB\tD\tA\tC\tD\tC\tD\tD\tA\tB\tB\tA\tC\nD\tC\tD\tD\tD\tA\tD\tC\tB\tA\tA\tD\tC\tD\tB\tD\tD\tC\tB\tA\nA\tB\tA\tD\tC\tA\tB\tB\tC\tC\tC\tB\tD\tA\tA\tA\tB\tB\tC\tD\nB\tC\tA\tC\tA\tA\tD\tA\tB\tC\tD\tA\tC\tB\tC\tB\tC\tC\tB\tC\nC\tA\tB\tD\tC\tA\tD\tA\tA\tD\tC\tB\tA\tA\tB\tB\tB\tA\tC\tD\nA\tD\tA\tB\tC\tB\tD\tB\tB\tC\tB\tA\tC\tC\tA\tA\tA\tC\tC\tD\nB\tA\tA\tB\tD\tA\tD\tC\tD\tA\tA\tD\tC\tC\tD\tA\tD\tA\tA\tB\nD\tC\tA\tB\tC\tA\tD\tD\tA\tA\tD\tA\tC\tB\tC\tB\tA\tA\tA\tC\nA\tB\tD\tC\tC\tA\tD\tA\tD\tA\tD\tD\tC\tC\tA\tB\tC\tB\tB\tD\nD\tC\tA\tD\tD\tA\tD\tB\tC\tA\tA\tD\tA\tC\tB\tC\tD\tA\tD\tB\nB\tA\tA\tC\tC\tC\tD\tB\tB\tC\tA\tA\tA\tD\tB\tB\tD\tD\tD\tC\nD\tC\tA\tB\tB\tA\tD\tA\tB\tB\tA\tD\tC\tC\tA\tC\tD\tB\tA\tB\nD\tC\tA\tB\tC\tA\tD\tB\tA\tA\tA\tD\tC\tC\tB\tC\tC\tA\tD\tB\nC\tB\tA\tC\tC\tA\tB\tA\tA\tD\tB\tA\tC\tA\tA\tA\tA\tB\tC\tB\nC\tC\tD\tA\tD\tC\tB\tB\tA\tB\tC\tD\tC\tB\tC\tC\tD\tA\tA\tA\nB\tA\tB\tA\tB\tA\tA\tA\tC\tC\tC\tB\tD\tD\tB\tB\tB\tB\tA\tA\nD\tC\tA\tD\tD\tA\tD\tB\tD\tA\tA\tD\tC\tC\tB\tB\tD\tB\tA\tB\nD\tC\tA\tD\tD\tA\tD\tB\tD\tA\tA\tD\tC\tC\tB\tC\tD\tA\tA\tB\nD\tC\tA\tD\tD\tA\tD\tB\tD\tA\tA\tD\tC\tC\tB\tB\tD\tA\tA\tB\nA\tC\tB\tA\tD\tA\tA\tB\tB\tB\tA\tD\tC\tB\tB\tA\tD\tD\tA\tD\nA\tC\tA\tB\tC\tB\tD\tB\tC\tD\tA\tD\tC\tC\tA\tD\tD\tD\tB\tA\nD\tA\tA\tA\tA\tA\tD\tB\tB\tB\tA\tA\tA\tC\tB\tC\tD\tD\tA\tB\nA\tC\tC\tD\tB\tA\tC\tD\tA\tA\tA\tA\tC\tC\tB\tA\tD\tC\tB\tB\nD\tC\tA\tD\tD\tA\tD\tA\tA\tD\tD\tD\tC\tC\tC\tD\tA\tA\tA\tB\nD\tC\tD\tB\tD\tA\tC\tA\tC\tA\tA\tD\tC\tC\tD\tD\tC\tC\tB\tD\nD\tC\tA\tD\tA\tA\tD\tB\tA\tB\tA\tD\tD\tC\tB\tB\tD\tD\tD\tC\nB\tC\tA\tB\tC\tA\tD\tB\tA\tD\tA\tD\tC\tC\tA\tC\tB\tB\tA\tB\nD\tC\tB\tD\tB\tA\tD\tC\tD\tA\tB\tD\tC\tC\tB\tC\tD\tD\tA\tB\nD\tC\tA\tD\tD\tA\tD\tB\tD\tA\tC\tD\tC\tC\tD\tA\tD\tA\tB\tD\nD\tC\tA\tB\tD\tA\tD\tB\tD\tB\tA\tD\tC\tC\tB\tD\tA\tB\tA\tD\nC\tC\tA\tC\tD\tA\tD\tB\tD\tB\tA\t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mode="r", theme="cobalt", height="400px"), | ||
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p("Input answer keys (Either numeric or character, separated by tabs.):"), | ||
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aceEditor("anskey", value="D\tC\tA\tD\tD\tA\tD\tB\tD\tA\tA\tD\tC\tC\tB\tC\tD\tA\tA\tB", mode="r", theme="chrome", height="50px"), | ||
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br(), | ||
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h3("Checking the 1-0 converted data"), | ||
p('Only the first 10 observations are displayed.'), | ||
tableOutput("check"), | ||
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br(), | ||
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downloadButton('downloadData', 'Download the 1-0 data file'), | ||
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br(), | ||
strong('R session info'), | ||
verbatimTextOutput("info3.out"), | ||
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p(br()) | ||
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||
), | ||
# tabPanel("Model Options", icon = icon("cog", lib = "font-awesome"), | ||
# strong('Option:'), | ||
# | ||
# | ||
# # radioButtons("optimmethod", strong("Optimization Method"), | ||
# # c("Broyden-Fletcher-Goldfarb-Shanno (BFGS)" = "BFGS", | ||
# # "Conjugate Gradients" = "CG", | ||
# # "Limited-memory Broyden-Fletcher-Goldfarb-Shanno (BFGS)" = "L-BFGS-B" | ||
# # ), selected = "BFGS"), | ||
# # p(h6('Broyden-Fletcher-Goldfarb-Shanno (BFGS) is the default method for the ltm package')), | ||
# # | ||
# # | ||
# # verbatimTextOutput('optimmethod.out'), | ||
# | ||
# | ||
# br(), | ||
# p(br()) | ||
# | ||
# | ||
# ), | ||
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||
tabPanel("About", icon = icon("dot-circle-o", lib = "font-awesome"), | ||
strong('IRT with Shiny'), | ||
p("IRTShiny Version 1.0.2"), | ||
p("IRTShiny Version 1.1"), | ||
p("The goal of this project is to help students and researchers run IRT analysis as easily as possible."), | ||
p('This application is developed with', | ||
a("Shiny.", href="http://www.rstudio.com/shiny/", target="_blank"), | ||
|
@@ -296,11 +296,11 @@ shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | |
a("GitHub Wiki page for IRTShiny", href="https://github.com/kylehamilton/IRTShiny/wiki", target="_blank"), | ||
br(), | ||
p("As always you are more than welcome to contact the project maintainer at [email protected]"), | ||
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||
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||
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||
br(), | ||
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||
strong('List of Packages Used'), br(), | ||
code('library(shiny)'),br(), | ||
code('library(shinyAce)'),br(), | ||
|
@@ -309,76 +309,76 @@ shinyUI(navbarPage("IRTShiny", windowTitle="IRTShiny v1.0.2", | |
code('library(ltm)'),br(), | ||
code('library(beeswarm)'),br(), | ||
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||
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||
br(), | ||
|
||
h4('Acknowledgments and Authors'), | ||
|
||
strong('Acknowledgments'), | ||
p('William Kyle Hamilton would like to thank the ', | ||
a("Health Communications and Interventions Lab at UC Merced", href="http://cameronhcilab.com/", target="_blank"), | ||
'for their comments and beta testing efforts on this application'), | ||
|
||
p('William Kyle Hamilton would like to thank the ', | ||
a("Health Communications and Interventions Lab at UC Merced", href="http://cameronhcilab.com/", target="_blank"), | ||
'for their comments and beta testing efforts on this application'), | ||
|
||
p('Atsushi Mizumoto would like to thank', | ||
a("Dr. Luke Plonsky", href="http://oak.ucc.nau.edu/ldp3/", target="_blank"), 'and', | ||
a("Dr. Yo In'nami", href="https://sites.google.com/site/yoinnami/", target="_blank"), | ||
'for their support and feedback to create this web application.'), | ||
'for their support and feedback to create this web application.'), | ||
|
||
br(), | ||
|
||
|
||
|
||
h5('Authors'), | ||
|
||
HTML('<div style="clear: left;"><img src="http://kylehamilton.com/wp-content/uploads/2014/11/kyle80.jpg" alt="" style="float: left; margin-right:5px" /></div>'), | ||
p(a("William Kyle Hamilton - University of California, Merced", href="http://www.kylehamilton.com", target="_blank")), | ||
p("William Kyle Hamilton maintains this application and has authored new features."), | ||
|
||
br(), | ||
HTML('<div style="clear: left;"><img src="http://kylehamilton.com/wp-content/uploads/2014/11/atsushi80.jpg" alt="" style="float: left; margin-right:5px" /></div>'), | ||
p(a("Atsushi Mizumoto, PhD - Kansai University", href="http://mizumot.com", target="_blank"),br(), | ||
p("Atsushi Mizumoto wrote the first version of this application; this application is a fork of the original which can be found", a("here", href="https://github.com/mizumot/irt", target="_blank")) | ||
|
||
|
||
), | ||
br(), | ||
strong('Bug Reports'), | ||
p("If you discover a problem with IRTShiny please submit it to the project GitHub page", | ||
|
||
p("If you discover a problem with IRTShiny please submit it to the project GitHub page", | ||
a("https://github.com/kylehamilton/IRTShiny/issues", href="https://github.com/kylehamilton/IRTShiny/issues", target="_blank"),br()), | ||
|
||
p("IRTShiny is an Open Source project, you are more than welcome to submit patches or features and help the project grow."), | ||
strong('License'), | ||
|
||
p("IRTShiny: Item Response Theory with Shiny"), | ||
p(" Copyright 2015 William Kyle Hamilton and Atsushi Mizumoto"), | ||
|
||
p(" This program is free software you can redistribute it and or modify | ||
it under the terms of the GNU General Public License as published by | ||
the Free Software Foundation either version 3 of the License or | ||
at your option any later version."), | ||
|
||
p("This program is distributed in the hope that it will be useful, | ||
but WITHOUT ANY WARRANTY; without even the implied warranty of | ||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | ||
GNU General Public License for more details."), | ||
|
||
p("You should have received a copy of the GNU General Public License | ||
along with this program. If not, see", a("http://www.gnu.org/licenses/gpl.html", href="http://www.gnu.org/licenses/gpl.html", target="_blank"),br()), | ||
img(src = "http://www.gnu.org/graphics/gplv3-127x51.png", seamless=NA), | ||
|
||
|
||
br(), | ||
|
||
strong('Futher Infomation'), | ||
p("If you would like to learn more about the GNU General Public License and what it means tl'dr legal has a simple explaination which can be found here", a("https://www.tldrlegal.com/l/gpl-3.0", href="https://www.tldrlegal.com/l/gpl-3.0", target="_blank"),br()), | ||
|
||
|
||
p(br()) | ||
|
||
) | ||
|
||
# )) | ||
|
||
) | ||
|