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PPanGGOLiN release 1.1.72
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@axbazin axbazin released this 25 Mar 10:24
· 1771 commits to master since this release
1.1.72
8db3411
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Learn about vigilant mode.
  • added the 'rgp' subcommand to predict regions of genomic plasticity
  • added the 'spot' subcommand to predict spots of insertion in the pangenome
  • added a few new output files in 'write' related to the two previous commands
  • the 'write' subcommand has been improved
  • added the 'panrgp' workflow. It will probably replace the main 'workflow' command in the future but for the next few versions, they will live side by side.
  • improved logging and added timing at the end of the 'panrgp' workflow.

pangenomes that were computed with previous versions should be compatible with the new commands.

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