Setup first model version for the SMILES-SELFIES modality pair #37
Workflow file for this run
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| name: Tests | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main, "release/*", "dev"] | |
| jobs: | |
| run_tests_ubuntu: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| python-version: ["3.8", "3.9", "3.10"] | |
| timeout-minutes: 20 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install pytest | |
| pip install sh | |
| - name: List dependencies | |
| run: | | |
| python -m pip list | |
| - name: Run pytest | |
| run: | | |
| pytest -v | |
| run_tests_macos: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["macos-latest"] | |
| python-version: ["3.8", "3.9", "3.10"] | |
| timeout-minutes: 20 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install pytest | |
| pip install sh | |
| - name: List dependencies | |
| run: | | |
| python -m pip list | |
| - name: Run pytest | |
| run: | | |
| pytest -v | |
| run_tests_windows: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["windows-latest"] | |
| python-version: ["3.8", "3.9", "3.10"] | |
| timeout-minutes: 20 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install pytest | |
| - name: List dependencies | |
| run: | | |
| python -m pip list | |
| - name: Run pytest | |
| run: | | |
| pytest -v | |
| # upload code coverage report | |
| code-coverage: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install pytest | |
| pip install pytest-cov[toml] | |
| pip install sh | |
| - name: Run tests and collect coverage | |
| run: pytest --cov src # NEEDS TO BE UPDATED WHEN CHANGING THE NAME OF "src" FOLDER | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 |